RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZNF705BP0CI00 300 aaPredicted RBP0.34□□□□□ -2.36
SRP54-207ENST00000555535 ZNF728P0DKX0 622 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 IGHV3-30-3P0DP02 117 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 CCL3P10147 92 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 GPX2P18283 190 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 ATP6V0CP27449 155 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 GRPRP30550 384 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 LCN1P31025 176 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 UGT2B10P36537 528 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 DAPP51397 102 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 AQP4P55087 323 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 CARD18P57730 90 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 LINC00313P59037 77 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 GNA12Q03113 381 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 EMX1Q04741 257 aaPredicted RBP0.34□□□□□ -2.36
SRP54-207ENST00000555535 STX3Q13277 289 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 RALGAPA2Q2PPJ7 1873 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 MESTQ5EB52 335 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.34□□□□□ -2.36
SRP54-207ENST00000555535 AMTNQ6UX39 209 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 KTN1-AS1Q86SY8 53 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 BAP18Q8IXM2 172 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 NATD1Q8N6N6 113 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 C15orf53Q8NAA6 179 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 FNDC9Q8TBE3 224 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 CCDC12Q8WUD4 166 aaPredicted RBP0.34□□□□□ -2.36
SRP54-207ENST00000555535 TAMM41Q96BW9 452 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 ZNF514Q96K75 400 aaPredicted RBP0.34□□□□□ -2.36
SRP54-207ENST00000555535 TMEM56Q96MV1 263 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 RETNLBQ9BQ08 111 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 TMEM208Q9BTX3 173 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 CHST5Q9GZS9 411 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 GOLPH3Q9H4A6 298 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 TMEM216Q9P0N5 145 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 PRO2289Q9P1D8 64 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 GLS2Q9UI32 602 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 MRM2Q9UI43 246 aaKnown RBP0.34□□□□□ -2.36
SRP54-207ENST00000555535 LINC00527Q9UJ94 153 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 HHLA3Q9XRX5 114 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 TNRC6AQ8NDV7 1962 aaKnown RBP0.34□□□□□ -2.36
SRP54-207ENST00000555535 IGKV3-7A0A075B6H7 116 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 TRGV5A0A0B4J1U4 118 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 A0A1W2PQD3 144 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 ZNF705FA8MVS1 300 aaPredicted RBP0.33□□□□□ -2.36
SRP54-207ENST00000555535 NDUFS8O00217 210 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 BHLHE40O14503 412 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 KMT2DO14686 5537 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 SGCEO43556 437 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 GSTZ1O43708 216 aaPredicted RBP0.33□□□□□ -2.36
SRP54-207ENST00000555535 KLRC4O43908 158 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 ORC5O43913 435 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 MPZL2O60487 215 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 BRI3O95415 125 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 PPBPP02775 128 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 CRYBA1P05813 215 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 RD3LP0DJH9 198 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 PVALBP20472 110 aaPredicted RBP0.33□□□□□ -2.36
SRP54-207ENST00000555535 NPPCP23582 126 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 CDK2P24941 298 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 XCL1P47992 114 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 TAS2R45P59539 299 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 TAS2R30P59541 319 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 HERVK_113P63121 156 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 GLO1Q04760 184 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 SMAGPQ0VAQ4 97 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 NNATQ16517 81 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 TBC1D28Q2M2D7 210 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 C18orf21Q32NC0 220 aaPredicted RBP0.33□□□□□ -2.36
SRP54-207ENST00000555535 LGALS9BQ3B8N2 356 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 NKAIN1Q4KMZ8 207 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 SPATA31B1PQ5VZV4 182 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 ZNF705AQ6ZN79 300 aaPredicted RBP0.33□□□□□ -2.36
SRP54-207ENST00000555535 SLC36A1Q7Z2H8 476 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 SPATA12Q7Z6I5 190 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 SPERTQ8NA61 448 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 ATP6V1C2Q8NEY4 427 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 OR5B17Q8NGF7 314 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 LHFPL5Q8TAF8 219 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 ASB17Q8WXJ9 295 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 LRRC45Q96CN5 670 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 SIKE1Q9BRV8 207 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 ZNF471Q9BX82 626 aaPredicted RBP0.33□□□□□ -2.36
SRP54-207ENST00000555535 C1QTNF6Q9BXI9 259 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 RAB1BQ9H0U4 201 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 C8orf4Q9NR00 106 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 BABAM2Q9NXR7 383 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 MAT2BQ9NZL9 334 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 COMMD9Q9P000 198 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 TAAR3PQ9P1P4 343 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 HHLA2Q9UM44 414 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 POFUT2Q9Y2G5 429 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 SNX10Q9Y5X0 201 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 ALPK2Q86TB3 2170 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 CLUHO75153 1309 aa0.33□□□□□ -2.36
SRP54-207ENST00000555535 SNRNP200O75643 2136 aaKnown RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 SCN3AQ9NY46 2000 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 IGKV2D-26A0A0A0MRZ7 120 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 IGKV1-9A0A0C4DH69 117 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 HMSDA8MTL9 139 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 H3BSA7 217 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms