RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CTF1Q16619 201 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 C5orf64Q2M2E5 130 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 C2orf76Q3KRA6 126 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 GPR107Q5VW38 600 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 LCNL1Q6ZST4 164 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 OR2AK2Q8NG84 335 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 OR52L2PQ8NGH6 319 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 OR56B1Q8NGI3 324 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 FAM46BQ96A09 425 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 SLC25A46Q96AG3 418 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 GFI1Q99684 422 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 NABP2Q9BQ15 211 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 SULT4A1Q9BR01 284 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 ZNF251Q9BRH9 671 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 MRPL20Q9BYC9 149 aaKnown RBP5.16□□□□□ -1.58
SLIRP-203ENST00000554074 OR51J1Q9H342 316 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 PIPOXQ9P0Z9 390 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 HSF4Q9ULV5 492 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 MGAT4AQ9UM21 535 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 SPATA2Q9UM82 520 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 SAA2-SAA4A0A096LPE2 208 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 IGHV7-81A0A0B4J1V7 117 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 SHISA3A0PJX4 238 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 OR5H14A6NHG9 310 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 I3L521 148 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 RAB29O14966 203 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 ATP6V0E1O15342 81 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 RBBP9O75884 186 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 OR8U8P0C7N1 319 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 SAA2P0DJI9 122 aaPredicted RBP5.15□□□□□ -1.59
SLIRP-203ENST00000554074 SLC2A2P11168 524 aaPredicted RBP5.15□□□□□ -1.59
SLIRP-203ENST00000554074 MC5RP33032 325 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 SERPINB10P48595 397 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 UNC119Q13432 240 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 DEFB136Q30KP8 78 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 C19orf54Q5BKX5 351 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 NKAPLQ5M9Q1 402 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF660Q6AZW8 331 aaPredicted RBP5.15□□□□□ -1.59
SLIRP-203ENST00000554074 LIN54Q6MZP7 749 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 C11orf87Q6NUJ2 197 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 MZT2AQ6P582 158 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 TMEM65Q6PI78 240 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 CLVS1Q8IUQ0 354 aaPredicted RBP5.15□□□□□ -1.59
SLIRP-203ENST00000554074 TCTEX1D1Q8N7M0 179 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF491Q8N8L2 437 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 MINDY2Q8NBR6 621 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 WWC2-AS2Q96NR7 200 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 DUX3Q96PT4 197 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 RNF5Q99942 180 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 FAAP24Q9BTP7 215 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 IFI27L2Q9H2X8 130 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.15□□□□□ -1.59
SLIRP-203ENST00000554074 KIAA1456Q9P272 454 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 RABL2AQ9UBK7 228 aaPredicted RBP5.15□□□□□ -1.59
SLIRP-203ENST00000554074 SLC23A1Q9UHI7 598 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 DAPK2Q9UIK4 370 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 RABL2BQ9UNT1 228 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 VSIG4Q9Y279 399 aa5.15□□□□□ -1.59
SLIRP-203ENST00000554074 LSM4Q9Y4Z0 139 aaKnown RBP5.15□□□□□ -1.59
SLIRP-203ENST00000554074 STAB2Q8WWQ8 2551 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 TRAV41A0A0B4J266 112 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 TMEM272A0A1B0GTI8 110 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 FOXI3A8MTJ6 420 aaPredicted RBP5.14□□□□□ -1.59
SLIRP-203ENST00000554074 SEC14L6B5MCN3 397 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 DIRAS3O95661 229 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF182P17025 639 aaPredicted RBP5.14□□□□□ -1.59
SLIRP-203ENST00000554074 ZBTB25P24278 435 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 BLVRBP30043 206 aaPredicted RBP5.14□□□□□ -1.59
SLIRP-203ENST00000554074 RPS19P39019 145 aaKnown RBP5.14□□□□□ -1.59
SLIRP-203ENST00000554074 OR3A3P47888 321 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 RAB9AP51151 201 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 LUMP51884 338 aaPredicted RBP5.14□□□□□ -1.59
SLIRP-203ENST00000554074 RAB25P57735 213 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 OR10A3P58181 314 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 VBP1P61758 197 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 PITPNAQ00169 270 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF616Q08AN1 781 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 SRSF7Q16629 238 aaKnown RBP eCLIP5.14□□□□□ -1.59
SLIRP-203ENST00000554074 IDNKQ5T6J7 187 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 HES5Q5TA89 166 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 OR10K2Q6IF99 312 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 PYHIN1Q6K0P9 492 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 C6orf201Q7Z4U5 140 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 NR2C2APQ86WQ0 139 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 OR11H1Q8NG94 326 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 OR5AN1Q8NGI8 311 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 OR1N2Q8NGR9 330 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 C15orf40Q8WUR7 153 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 EDARADDQ8WWZ3 215 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 ISOC1Q96CN7 298 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 DGCR14Q96DF8 476 aaKnown RBP5.14□□□□□ -1.59
SLIRP-203ENST00000554074 CYYR1Q96J86 154 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 RITA1Q96K30 269 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 AGMATQ9BSE5 352 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 NICN1Q9BSH3 213 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 LPAR5Q9H1C0 372 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 DCSTAMPQ9H295 470 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 DIABLOQ9NR28 239 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 PLEKHJ1Q9NW61 149 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 CCDC59Q9P031 241 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms