RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PRAMEF5Q5TYX0 476 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 ADAD2Q8NCV1 583 aaKnown RBP11.83□□□□□ -0.52
SHMT2-208ENST00000553868 LY6G5BQ8NDX9 201 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 OR8U1Q8NH10 309 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 CLDND2Q8NHS1 167 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 ZNF418Q8TF45 676 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-208ENST00000553868 CAPSLQ8WWF8 208 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 SLC2A9Q9NRM0 540 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 C9orf170A2RU37 121 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 CRYM-AS1A6NIL9 109 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 C17orf98A8MV24 154 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 A8MXK9 166 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 HSD17B6O14756 317 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 ENSAO43768 121 aaKnown RBP11.82□□□□□ -0.52
SHMT2-208ENST00000553868 FOXH1O75593 365 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 B3GALNT1O75752 331 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 SFT2D2O95562 160 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 DUS4LO95620 317 aaKnown RBP11.82□□□□□ -0.52
SHMT2-208ENST00000553868 OMGP23515 440 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 PPP1R1AQ13522 171 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 PHLDA2Q53GA4 152 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 KCTD9Q7L273 389 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 C12orf45Q8N5I9 185 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-208ENST00000553868 ZNF645Q8N7E2 425 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 BVESQ8NE79 360 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 COQ8AQ8NI60 647 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 RTN4IP1Q8WWV3 396 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-208ENST00000553868 TMEM230Q96A57 120 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 PHB2Q99623 299 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 NAA60Q9H7X0 242 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 CCL28Q9NRJ3 127 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 ZNF221Q9UK13 617 aa11.82□□□□□ -0.52
SHMT2-208ENST00000553868 A0A0B4J2A0 478 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 M0R1W7 72 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 MPPED1O15442 326 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 CD34P28906 385 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 DLX6P56179 175 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 LMO4P61968 165 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 SRPXP78539 464 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 ZNF818PQ6ZRF7 136 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 KIR3DL3Q8N743 410 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 C8orf31Q8N9H6 132 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 LINC01356Q8N9X3 169 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 ABHD14AQ9BUJ0 271 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 SUCNR1Q9BXA5 334 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 OR2D2Q9H210 308 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 SHPKQ9UHJ6 478 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 PSG11Q9UQ72 335 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 SESN1Q9Y6P5 492 aa11.81□□□□□ -0.52
SHMT2-208ENST00000553868 C22orf46C9J442 243 aa11.8□□□□□ -0.52
SHMT2-208ENST00000553868 IGHV1-8P0DP01 117 aa11.8□□□□□ -0.52
SHMT2-208ENST00000553868 GPR12P47775 334 aa11.8□□□□□ -0.52
SHMT2-208ENST00000553868 ERVFRD-1P60508 538 aa11.8□□□□□ -0.52
SHMT2-208ENST00000553868 AKAP14Q86UN6 197 aa11.8□□□□□ -0.52
SHMT2-208ENST00000553868 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-208ENST00000553868 OR52B4Q8NGK2 314 aa11.8□□□□□ -0.52
SHMT2-208ENST00000553868 CASTOR1Q8WTX7 329 aa11.8□□□□□ -0.52
SHMT2-208ENST00000553868 MITD1Q8WV92 249 aa11.8□□□□□ -0.52
SHMT2-208ENST00000553868 GALNT14Q96FL9 552 aa11.8□□□□□ -0.52
SHMT2-208ENST00000553868 PARP12Q9H0J9 701 aaKnown RBP11.8□□□□□ -0.52
SHMT2-208ENST00000553868 ONECUT1Q9UBC0 465 aa11.8□□□□□ -0.52
SHMT2-208ENST00000553868 A0A087X0M5 115 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 A0A1B0GX30 115 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 ST8SIA5O15466 376 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 PGLYRP1O75594 196 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-208ENST00000553868 CATR1Q13166 79 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 SLC9A3R2Q15599 337 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 LIN54Q6MZP7 749 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 C1orf122Q6ZSJ8 110 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 TBC1D26Q86UD7 250 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 LDLRAD3Q86YD5 345 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 DRAM1Q8N682 238 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 UXS1Q8NBZ7 420 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 TNFRSF14Q92956 283 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 PPP1R14BQ96C90 147 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 TMEM133Q9H2Q1 129 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 ESM1Q9NQ30 184 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 LIN7CQ9NUP9 197 aaKnown RBP11.79□□□□□ -0.52
SHMT2-208ENST00000553868 PIPOXQ9P0Z9 390 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 GAB2Q9UQC2 676 aa11.79□□□□□ -0.52
SHMT2-208ENST00000553868 C3orf85A0A1B0GTC6 90 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 H0Y980 276 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 TOR1AO14656 332 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 RAB29O14966 203 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 MMP23AO75900 390 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 CCNKO75909 580 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 SULT1A3P0DMM9 295 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 SULT1A4P0DMN0 295 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 IL3RAP26951 378 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 SUPT4H1P63272 117 aaKnown RBP11.78□□□□□ -0.52
SHMT2-208ENST00000553868 BTNL3Q6UXE8 466 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 ZNF66Q6ZN08 573 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 SLC25A48Q6ZT89 311 aaKnown RBP11.78□□□□□ -0.52
SHMT2-208ENST00000553868 LGI3Q8N145 548 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 LINC00311Q8N616 119 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 TCTEX1D1Q8N7M0 179 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 ZNF439Q8NDP4 499 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 OR9G1Q8NH87 305 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 HSD17B10Q99714 261 aaKnown RBP11.78□□□□□ -0.52
SHMT2-208ENST00000553868 AGMATQ9BSE5 352 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms