RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 RAB22AQ9UL26 194 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 TRDCB7Z8K6 153 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 CCL24O00175 119 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 RAB29O14966 203 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 NDUFA3O95167 84 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 IGHG4P01861 327 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 HLA-DRB1P01911 266 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 IGF1P05019 195 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 EGR2P11161 476 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-206ENST00000553529 ZBTB25P24278 435 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 MYL9P24844 172 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 PSMB8P28062 276 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 FOXE3Q13461 319 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 CXorf66Q5JRM2 361 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-206ENST00000553529 NPBQ8NG41 125 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 RCC1LQ96I51 464 aaKnown RBP14.2□□□□□ -0.14
SHMT2-206ENST00000553529 PIPOXQ9P0Z9 390 aa14.2□□□□□ -0.14
SHMT2-206ENST00000553529 RRP15Q9Y3B9 282 aaKnown RBP14.2□□□□□ -0.14
SHMT2-206ENST00000553529 H7C2Y5 167 aa14.19□□□□□ -0.14
SHMT2-206ENST00000553529 J3QRK9 145 aa14.19□□□□□ -0.14
SHMT2-206ENST00000553529 FABP7O15540 132 aa14.19□□□□□ -0.14
SHMT2-206ENST00000553529 HIST1H1DP16402 221 aaKnown RBP14.19□□□□□ -0.14
SHMT2-206ENST00000553529 MYCNOSP40205 109 aa14.19□□□□□ -0.14
SHMT2-206ENST00000553529 GNB1P62873 340 aa14.19□□□□□ -0.14
SHMT2-206ENST00000553529 C19orf54Q5BKX5 351 aa14.19□□□□□ -0.14
SHMT2-206ENST00000553529 RNF152Q8N8N0 203 aa14.19□□□□□ -0.14
SHMT2-206ENST00000553529 RIMS4Q9H426 269 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-206ENST00000553529 ZFP57Q9NU63 452 aa14.19□□□□□ -0.14
SHMT2-206ENST00000553529 LRRC42Q9Y546 428 aa14.19□□□□□ -0.14
SHMT2-206ENST00000553529 RRHO14718 337 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 PDCD5O14737 125 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 OR8U9P0C7N5 309 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 CX3CL1P78423 397 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 SSBP2P81877 361 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-206ENST00000553529 DEFA5Q01523 94 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 MXD1Q05195 221 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 NEDD8Q15843 81 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 LIN54Q6MZP7 749 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 COMMD1Q8N668 190 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 OR5AN1Q8NGI8 311 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 OR8U1Q8NH10 309 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 MYOZ3Q8TDC0 251 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 ATG5Q9H1Y0 275 aa14.18□□□□□ -0.14
SHMT2-206ENST00000553529 DNAH9Q9NYC9 4486 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 TRAV41A0A0B4J266 112 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 M0R1X1 148 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 ELANEP08246 267 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 GADD45AP24522 165 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 EGFEM1PQ0D2K5 195 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 PSG5Q15238 335 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 FAM71F2Q6NXP2 309 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 OR5H6Q8NGV6 325 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 LGALS14Q8TCE9 139 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 NUDCD2Q8WVJ2 157 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 PTX4Q96A99 478 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 CHCHD6Q9BRQ6 235 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 CABLES2Q9BTV7 478 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 OR2D2Q9H210 308 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 SDHAF2Q9NX18 166 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 DAPK2Q9UIK4 370 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 WASHC3Q9Y3C0 194 aa14.17□□□□□ -0.14
SHMT2-206ENST00000553529 A0A1W2PN81 502 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 ARPC1BO15143 372 aaKnown RBP14.16□□□□□ -0.14
SHMT2-206ENST00000553529 CA2P00918 260 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 IGLV1-40P01703 118 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 GSTP1P09211 210 aaKnown RBP14.16□□□□□ -0.14
SHMT2-206ENST00000553529 SDC2P34741 201 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 CHRNA7P36544 502 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 CDX1P47902 265 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-206ENST00000553529 PJVKQ0ZLH3 352 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 PLGLAQ15195 96 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 C11orf87Q6NUJ2 197 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 ZNF773Q6PK81 442 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 REC114Q7Z4M0 266 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 ZNF491Q8N8L2 437 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 CENPOQ9BU64 300 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 KIAA1456Q9P272 454 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 METTL1Q9UBP6 276 aaKnown RBP14.16□□□□□ -0.14
SHMT2-206ENST00000553529 STUB1Q9UNE7 303 aa14.16□□□□□ -0.14
SHMT2-206ENST00000553529 TRBV6-7A0A0A0MS04 114 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 OR5H14A6NHG9 310 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 ITGB1BP1O14713 200 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 IGLV2-23P01705 113 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 FCER2P06734 321 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 PTHLHP12272 177 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 RAB6AP20340 208 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 ARFRP1Q13795 201 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 KIR2DS1Q14954 304 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 MINDY2Q8NBR6 621 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 OR11H1Q8NG94 326 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 OR4A4PQ8NGN8 299 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 ABHD5Q8WTS1 349 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 C4orf3Q8WVX3 66 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 MS4A10Q96PG2 267 aa14.15□□□□□ -0.14
SHMT2-206ENST00000553529 LOC100506127A0A0U1RQW1 187 aa14.14□□□□□ -0.15
SHMT2-206ENST00000553529 TMEM235A6NFC5 223 aa14.14□□□□□ -0.15
SHMT2-206ENST00000553529 SLC25A17O43808 307 aa14.14□□□□□ -0.15
SHMT2-206ENST00000553529 SSX5O60225 188 aa14.14□□□□□ -0.15
SHMT2-206ENST00000553529 FGF9P31371 208 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-206ENST00000553529 PSMD7P51665 324 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms