RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 MRGPRDQ8TDS7 321 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 THRSPQ92748 146 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 TAF15Q92804 592 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATXN3-220ENST00000553491 ZNF714Q96N38 554 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 NEDD4LQ96PU5 975 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 SSX3Q99909 188 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 FAAP24Q9BTP7 215 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 C1QTNF4Q9BXJ3 329 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 RHOFQ9HBH0 211 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 ISYNA1Q9NPH2 558 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 KIF25Q9UIL4 384 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 TRAPPC2LQ9UL33 140 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 SSR3Q9UNL2 185 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 LSM2Q9Y333 95 aaKnown RBP3.78□□□□□ -1.8
ATXN3-220ENST00000553491 HILPDAQ9Y5L2 63 aa3.78□□□□□ -1.8
ATXN3-220ENST00000553491 IGHV3-43A0A0B4J1X8 118 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 TRAV24A0A0B4J272 114 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 A0A1W2PPE3 182 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 A0A1W2PPQ1 181 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ODAMA1E959 279 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 PRAC2D3DTV9 90 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 CCRL2O00421 344 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ZNF737O75373 536 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 GPX5O75715 221 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 IGHV4-59P01825 116 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 FBP1P09467 338 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 IGHV1-8P0DP01 117 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 IGHV3-43DP0DP04 118 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 FUT3P21217 361 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 CDK2P24941 298 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 PSMA1P25786 263 aaKnown RBP3.77□□□□□ -1.81
ATXN3-220ENST00000553491 BLVRBP30043 206 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-220ENST00000553491 SAA4P35542 130 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 VEGFCP49767 419 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 GNG10P50151 68 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 PSMD7P51665 324 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 UBE2E1P51965 193 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 RBM11P57052 281 aaKnown RBP3.77□□□□□ -1.81
ATXN3-220ENST00000553491 BPIFB3P59826 476 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 GABARAPL2P60520 117 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 LSM3P62310 102 aaKnown RBP3.77□□□□□ -1.81
ATXN3-220ENST00000553491 UBA52P62987 128 aaKnown RBP3.77□□□□□ -1.81
ATXN3-220ENST00000553491 MRPS15P82914 257 aaKnown RBP3.77□□□□□ -1.81
ATXN3-220ENST00000553491 MEF2CQ06413 473 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-220ENST00000553491 SLC9A3R2Q15599 337 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 C2orf76Q3KRA6 126 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ELP2Q6IA86 826 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ASPHD2Q6ICH7 369 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 OR52W1Q6IF63 320 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 C16orf87Q6PH81 154 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 TRAT1Q6PIZ9 186 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ZNF773Q6PK81 442 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 BAIAP2L2Q6UXY1 529 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ASCL4Q6XD76 172 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 TMEM91Q6ZNR0 172 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 LRRTM1Q86UE6 522 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ABHD12Q8N2K0 398 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 KIR3DL3Q8N743 410 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ZDHHC22Q8N966 263 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 OR51D1Q8NGF3 324 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 KCNG3Q8TAE7 436 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 C8orf46Q8TAG6 207 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 PLPPR1Q8TBJ4 325 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 RPS4Y2Q8TD47 263 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 C17orf50Q8WW18 174 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 DYRK2Q92630 601 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 LEAP2Q969E1 77 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ARL11Q969Q4 196 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 PPP1R14BQ96C90 147 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 DGCR14Q96DF8 476 aaKnown RBP3.77□□□□□ -1.81
ATXN3-220ENST00000553491 CST11Q9H112 138 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ATG5Q9H1Y0 275 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 GAL3ST2Q9H3Q3 398 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ESM1Q9NQ30 184 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ABCB10Q9NRK6 738 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 PLEKHJ1Q9NW61 149 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 KCNIP1Q9NZI2 227 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 ZNF581Q9P0T4 197 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 RNF150Q9ULK6 438 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 V9GY05 133 aa3.77□□□□□ -1.81
ATXN3-220ENST00000553491 WNK1Q9H4A3 2382 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 PLXNB1O43157 2135 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 A0A087WXM4 84 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 TRDV1A0A1B0GX56 115 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 TMEM30CPA0ZSE6 113 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 ZNF729A6NN14 1252 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-220ENST00000553491 C17orf98A8MV24 154 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 H3BUX3 64 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 AIPO00170 330 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 SDCBPO00560 298 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-220ENST00000553491 MRPS14O60783 128 aaKnown RBP3.76□□□□□ -1.81
ATXN3-220ENST00000553491 MMP23AO75900 390 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 TNFAIP8O95379 198 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 MELTFP08582 738 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 UCHL1P09936 223 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 UBBP0CG47 229 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 SLC2A2P11168 524 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-220ENST00000553491 CD36P16671 472 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 RAB3BP20337 219 aa3.76□□□□□ -1.81
ATXN3-220ENST00000553491 GZMHP20718 246 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms