RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TRBV5-7A0A0A0MS05 114 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 A0A0G2JLM5 398 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 H3BNX3 289 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 H3BUA1 57 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 SLC25A17O43808 307 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 TPPPO94811 219 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 IGKV1-16P04430 117 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 CD7P09564 240 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 CPEP16870 476 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 MC5RP33032 325 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 MECP2P51608 486 aaKnown RBP6.87□□□□□ -1.31
SYNE2-209ENST00000553308 LINC00205P59089 165 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 SMN1Q16637 294 aaKnown RBP6.87□□□□□ -1.31
SYNE2-209ENST00000553308 MOGAT2Q3SYC2 334 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 Q499Y3 187 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 CBR4Q8N4T8 237 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 SVOPQ8N4V2 548 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 DEFB125Q8N687 156 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 GHSRQ92847 366 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 RNF5Q99942 180 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 NEURL2Q9BR09 285 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 SRD5A3Q9H8P0 318 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 FGF20Q9NP95 211 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-209ENST00000553308 SIGLEC8Q9NYZ4 499 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 ABRACLQ9P1F3 81 aa6.87□□□□□ -1.31
SYNE2-209ENST00000553308 PEF1Q9UBV8 284 aaKnown RBP6.87□□□□□ -1.31
SYNE2-209ENST00000553308 RPL36Q9Y3U8 105 aaKnown RBP6.87□□□□□ -1.31
SYNE2-209ENST00000553308 PROP1O75360 226 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 RBMXL2O75526 392 aaKnown RBP6.86□□□□□ -1.31
SYNE2-209ENST00000553308 OR2A4O95047 310 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 SPDEFO95238 335 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 RPS16P62249 146 aaKnown RBP6.86□□□□□ -1.31
SYNE2-209ENST00000553308 PJVKQ0ZLH3 352 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 RPEL1Q2QD12 228 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 CD300EQ496F6 205 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-209ENST00000553308 YIF1BQ5BJH7 314 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 ZNF343Q6P1L6 599 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 TMPRSS11AQ6ZMR5 421 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 C6orf201Q7Z4U5 140 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 ZNF383Q8NA42 475 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 BVESQ8NE79 360 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 PGLYRP3Q96LB9 341 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 NEDD4LQ96PU5 975 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 TSNAXQ99598 290 aaKnown RBP6.86□□□□□ -1.31
SYNE2-209ENST00000553308 AGMATQ9BSE5 352 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 FAAP24Q9BTP7 215 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 TINAGL1Q9GZM7 467 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-209ENST00000553308 BABAM2Q9NXR7 383 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 OR1A1Q9P1Q5 309 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 CLEC2DQ9UHP7 191 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 LRRC42Q9Y546 428 aa6.86□□□□□ -1.31
SYNE2-209ENST00000553308 PNMA8CA0A1B0GUJ8 204 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 ZNF785A8K8V0 405 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 WBP4O75554 376 aaKnown RBP6.85□□□□□ -1.31
SYNE2-209ENST00000553308 CNIH1O95406 144 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 NAPSAO96009 420 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 APELAP0DMC3 54 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 AADACP22760 399 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 DCKP27707 260 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 CAPGP40121 348 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 PMS2P11Q13670 270 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 TATDN3Q17R31 274 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 OR10K2Q6IF99 312 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 ZNF880Q6PDB4 577 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 CDH26Q8IXH8 852 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 OR2K2Q8NGT1 345 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 SETD6Q8TBK2 473 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 DERL3Q96Q80 235 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 C11orf54Q9H0W9 315 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-209ENST00000553308 KCNK15Q9H427 330 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 CHMP1AQ9HD42 196 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-209ENST00000553308 SLC2A8Q9NY64 477 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 COA4Q9NYJ1 87 aa6.85□□□□□ -1.31
SYNE2-209ENST00000553308 LOC100130705A0A1B0GUX0 176 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 OR11H12B2RN74 326 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 BMPR1BO00238 502 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 DYNC1I1O14576 645 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 ITGB1BP1O14713 200 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 IGLV2-23P01705 113 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 EDN2P20800 178 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 PDPNQ86YL7 162 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 LAX1Q8IWV1 398 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 NKAIN3Q8N8D7 197 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 DYNLRB2Q8TF09 96 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 DDB2Q92466 427 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 SLC29A1Q99808 456 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 NICN1Q9BSH3 213 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 HDHD3Q9BSH5 251 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-209ENST00000553308 ST6GALNAC5Q9BVH7 336 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 FAM53CQ9NYF3 392 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 PEMTQ9UBM1 199 aa6.84□□□□□ -1.31
SYNE2-209ENST00000553308 A0A0B4J203 849 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 CXorf65A6NEN9 183 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 M0R1X1 148 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 CIB2O75838 187 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 APOA2P02652 100 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 CRYGBP07316 175 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 MYL12AP19105 171 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 HTR2CP28335 458 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 CEACAM6P40199 344 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms