RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 C13orf42A0A1B0GVH6 325 aa16.44■□□□□ 0.22
SMARCD1-212ENST00000551966 MECP2P51608 486 aaKnown RBP16.44■□□□□ 0.22
SMARCD1-212ENST00000551966 SSBP2P81877 361 aaPredicted RBP16.44■□□□□ 0.22
SMARCD1-212ENST00000551966 FXYD3Q14802 87 aa16.44■□□□□ 0.22
SMARCD1-212ENST00000551966 POC5Q8NA72 575 aa16.44■□□□□ 0.22
SMARCD1-212ENST00000551966 ZNF485Q8NCK3 441 aa16.44■□□□□ 0.22
SMARCD1-212ENST00000551966 IL17DQ8TAD2 202 aa16.44■□□□□ 0.22
SMARCD1-212ENST00000551966 IGKV1-16P04430 117 aa16.43■□□□□ 0.22
SMARCD1-212ENST00000551966 CAPGP40121 348 aa16.43■□□□□ 0.22
SMARCD1-212ENST00000551966 ZNF880Q6PDB4 577 aa16.43■□□□□ 0.22
SMARCD1-212ENST00000551966 GTSCR1Q86UQ5 136 aa16.43■□□□□ 0.22
SMARCD1-212ENST00000551966 DRAXINQ8NBI3 349 aaPredicted RBP16.43■□□□□ 0.22
SMARCD1-212ENST00000551966 ABRACLQ9P1F3 81 aa16.43■□□□□ 0.22
SMARCD1-212ENST00000551966 CIB2O75838 187 aa16.42■□□□□ 0.22
SMARCD1-212ENST00000551966 TRBV12-3P01733 135 aa16.42■□□□□ 0.22
SMARCD1-212ENST00000551966 DEFA5Q01523 94 aa16.42■□□□□ 0.22
SMARCD1-212ENST00000551966 C6orf201Q7Z4U5 140 aa16.42■□□□□ 0.22
SMARCD1-212ENST00000551966 SVOPQ8N4V2 548 aa16.42■□□□□ 0.22
SMARCD1-212ENST00000551966 GRPEL2Q8TAA5 225 aa16.42■□□□□ 0.22
SMARCD1-212ENST00000551966 SIGLEC8Q9NYZ4 499 aa16.42■□□□□ 0.22
SMARCD1-212ENST00000551966 CEPT1Q9Y6K0 416 aa16.42■□□□□ 0.22
SMARCD1-212ENST00000551966 A0A0G2JLM5 398 aa16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 H3BUA1 57 aa16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 SLC22A1O15245 554 aa16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 ATP5HO75947 161 aa16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 NAPSAO96009 420 aa16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 RPS16P62249 146 aaKnown RBP16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 MOGAT2Q3SYC2 334 aa16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 OR10K2Q6IF99 312 aa16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 NEDD4LQ96PU5 975 aa16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 DERL3Q96Q80 235 aa16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 C11orf54Q9H0W9 315 aaPredicted RBP16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 DIMT1Q9UNQ2 313 aaKnown RBP16.41■□□□□ 0.22
SMARCD1-212ENST00000551966 ALMS1Q8TCU4 4167 aa16.4■□□□□ 0.22
SMARCD1-212ENST00000551966 ITGB1BP1O14713 200 aa16.4■□□□□ 0.22
SMARCD1-212ENST00000551966 PJVKQ0ZLH3 352 aa16.4■□□□□ 0.22
SMARCD1-212ENST00000551966 LCN12Q6JVE5 192 aa16.4■□□□□ 0.22
SMARCD1-212ENST00000551966 ZNF343Q6P1L6 599 aa16.4■□□□□ 0.22
SMARCD1-212ENST00000551966 Q8N402 240 aa16.4■□□□□ 0.22
SMARCD1-212ENST00000551966 ZNF383Q8NA42 475 aa16.4■□□□□ 0.22
SMARCD1-212ENST00000551966 PLEKHA3Q9HB20 300 aa16.4■□□□□ 0.22
SMARCD1-212ENST00000551966 OR1A1Q9P1Q5 309 aa16.4■□□□□ 0.22
SMARCD1-212ENST00000551966 PEF1Q9UBV8 284 aaKnown RBP16.4■□□□□ 0.22
SMARCD1-212ENST00000551966 SHISA3A0PJX4 238 aa16.39■□□□□ 0.21
SMARCD1-212ENST00000551966 RBMXL2O75526 392 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-212ENST00000551966 CPEP16870 476 aa16.39■□□□□ 0.21
SMARCD1-212ENST00000551966 HTR2CP28335 458 aa16.39■□□□□ 0.21
SMARCD1-212ENST00000551966 DYRK1AQ13627 763 aa16.39■□□□□ 0.21
SMARCD1-212ENST00000551966 TSNAXQ99598 290 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-212ENST00000551966 UQCC2Q9BRT2 126 aa16.39■□□□□ 0.21
SMARCD1-212ENST00000551966 GHRLQ9UBU3 117 aa16.39■□□□□ 0.21
SMARCD1-212ENST00000551966 EXOSC1Q9Y3B2 195 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-212ENST00000551966 PNMA8CA0A1B0GUJ8 204 aa16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 RBMY1BA6NDE4 496 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 RBMY1EA6NEQ0 496 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 SLC25A17O43808 307 aa16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 SPDEFO95238 335 aa16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 BRI3O95415 125 aa16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 CRYGBP07316 175 aa16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 RBMY1DP0C7P1 496 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 CEACAM6P40199 344 aa16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 NICN1Q9BSH3 213 aa16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 C9orf16Q9BUW7 83 aa16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 TINAGL1Q9GZM7 467 aaPredicted RBP16.38■□□□□ 0.21
SMARCD1-212ENST00000551966 ZNF785A8K8V0 405 aa16.37■□□□□ 0.21
SMARCD1-212ENST00000551966 IGLV2-23P01705 113 aa16.37■□□□□ 0.21
SMARCD1-212ENST00000551966 MYL12AP19105 171 aa16.37■□□□□ 0.21
SMARCD1-212ENST00000551966 RPS27AP62979 156 aaKnown RBP16.37■□□□□ 0.21
SMARCD1-212ENST00000551966 SETD6Q8TBK2 473 aa16.37■□□□□ 0.21
SMARCD1-212ENST00000551966 DYNC1I1O14576 645 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 CNIH1O95406 144 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 CD81P60033 236 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 TATDN3Q17R31 274 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 ZFP1Q6P2D0 407 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 DEFB125Q8N687 156 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 NKAIN3Q8N8D7 197 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 BVESQ8NE79 360 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 PTX4Q96A99 478 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 TMEM80Q96HE8 168 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 NEURL2Q9BR09 285 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 KCNK15Q9H427 330 aa16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 CHMP1AQ9HD42 196 aaPredicted RBP16.36■□□□□ 0.21
SMARCD1-212ENST00000551966 CD7P09564 240 aa16.35■□□□□ 0.21
SMARCD1-212ENST00000551966 AADACP22760 399 aa16.35■□□□□ 0.21
SMARCD1-212ENST00000551966 ZBTB25P24278 435 aa16.35■□□□□ 0.21
SMARCD1-212ENST00000551966 RNLSQ5VYX0 342 aa16.35■□□□□ 0.21
SMARCD1-212ENST00000551966 PDPNQ86YL7 162 aa16.35■□□□□ 0.21
SMARCD1-212ENST00000551966 HDHD3Q9BSH5 251 aaPredicted RBP16.35■□□□□ 0.21
SMARCD1-212ENST00000551966 TM2D1Q9BX74 207 aa16.35■□□□□ 0.21
SMARCD1-212ENST00000551966 A0A0A6YYD4 124 aa16.34■□□□□ 0.21
SMARCD1-212ENST00000551966 TRBV6-6A0A0A6YYG2 114 aa16.34■□□□□ 0.21
SMARCD1-212ENST00000551966 IRGMA1A4Y4 181 aa16.34■□□□□ 0.21
SMARCD1-212ENST00000551966 OR2A4O95047 310 aa16.34■□□□□ 0.21
SMARCD1-212ENST00000551966 SCTP09683 121 aa16.34■□□□□ 0.21
SMARCD1-212ENST00000551966 UNC119Q13432 240 aa16.34■□□□□ 0.21
SMARCD1-212ENST00000551966 INSL4Q14641 139 aa16.34■□□□□ 0.21
SMARCD1-212ENST00000551966 MRGPRG-AS1Q2M3A8 158 aa16.34■□□□□ 0.21
SMARCD1-212ENST00000551966 RPEL1Q2QD12 228 aa16.34■□□□□ 0.21
SMARCD1-212ENST00000551966 CD300EQ496F6 205 aaPredicted RBP16.34■□□□□ 0.21
SMARCD1-212ENST00000551966 OR2K2Q8NGT1 345 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms