RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TNFAIP8L1Q8WVP5 186 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 PHF21AQ96BD5 680 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 ZNF184Q99676 751 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-214ENST00000550893 ZNF251Q9BRH9 671 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 NICN1Q9BSH3 213 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 CLEC7AQ9BXN2 247 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 TEX12Q9BXU0 123 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 ANKRD60Q9BZ19 345 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 NCOR1P1Q9H4R4 102 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 RANBP3Q9H6Z4 567 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-214ENST00000550893 EXOSC4Q9NPD3 245 aaKnown RBP3.79□□□□□ -1.8
SCAF11-214ENST00000550893 PLSCR3Q9NRY6 295 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 BABAM2Q9NXR7 383 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 CALYQ9NYX4 217 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 SLC7A11Q9UPY5 501 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 PSG11Q9UQ72 335 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 HSPE1-MOB4S4R3N1 261 aa3.79□□□□□ -1.8
SCAF11-214ENST00000550893 DNAH6Q9C0G6 4158 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 IGKV1-6A0A0C4DH72 117 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 KBTBD11-OT1A0A1B0GTJ5 212 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 EFCAB10A6NFE3 127 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 TMEM14DPA8MWL7 114 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 G3V4G9 280 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 BUB1B-PAK6H3BSN5 160 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 UCHL1P09936 223 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 OCM2P0CE71 109 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 RCC1P18754 421 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-214ENST00000550893 GABRR1P24046 479 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 CRHBPP24387 322 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 TGFBR2P37173 567 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 MAP2K4P45985 399 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 CAPZA1P52907 286 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 WNT4P56705 351 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 NDPQ00604 133 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 EBI3Q14213 229 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 FCN2Q15485 313 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 Q499Y3 187 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 ZNF876PQ49A33 203 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 YIF1BQ5BJH7 314 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 KRBOX4Q5JUW0 171 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 C1orf100Q5SVJ3 147 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 MINOS1Q5TGZ0 78 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 ZNF880Q6PDB4 577 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 RBMS3Q6XE24 437 aaKnown RBP3.78□□□□□ -1.8
SCAF11-214ENST00000550893 GDPGP1Q6ZNW5 385 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 SERPINA12Q8IW75 414 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 DHRSXQ8N5I4 330 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 STPG4Q8N801 248 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 OR5D14Q8NGL3 314 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 MRGPRDQ8TDS7 321 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 GPR148Q8TDV2 347 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 TSEN15Q8WW01 171 aaKnown RBP3.78□□□□□ -1.8
SCAF11-214ENST00000550893 TMEM80Q96HE8 168 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 C17orf77Q96MU5 243 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 CITED2Q99967 270 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-214ENST00000550893 SULT4A1Q9BR01 284 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 HDHD3Q9BSH5 251 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-214ENST00000550893 BARHL1Q9BZE3 327 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 GFRA4Q9GZZ7 299 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 BEX1Q9HBH7 125 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 RANGRFQ9HD47 186 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-214ENST00000550893 TAS2R3Q9NYW6 316 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 KCNK7Q9Y2U2 307 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 EXOSC1Q9Y3B2 195 aaKnown RBP3.78□□□□□ -1.8
SCAF11-214ENST00000550893 HILPDAQ9Y5L2 63 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 MINOS1-NBL1R4GNA1 71 aa3.78□□□□□ -1.8
SCAF11-214ENST00000550893 IGHV3-43A0A0B4J1X8 118 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 A0A1B0GUS0 222 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 A0A1W2PPH5 198 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 hADV38S2A0JD32 116 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 ZNF729A6NN14 1252 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-214ENST00000550893 J3QR06 171 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 SLC22A1O15245 554 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 NAPSAO96009 420 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 MT-ND4P03905 459 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 HCKP08631 526 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 IGHV3-43DP0DP04 118 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 ZNF44P15621 663 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 CELP19835 753 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 RAB3AP20336 220 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 SERPINA2P20848 420 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 HTR2CP28335 458 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 GABRA5P31644 462 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 ZNF93P35789 620 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-214ENST00000550893 ATP6V1E1P36543 226 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 GLP1RP43220 463 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 GBX2P52951 348 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-214ENST00000550893 TMEM50BP56557 158 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 FABP5Q01469 135 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 SLC34A1Q06495 639 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 ZNF816Q0VGE8 651 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-214ENST00000550893 MRPL28Q13084 256 aaKnown RBP3.77□□□□□ -1.81
SCAF11-214ENST00000550893 RIPK1Q13546 671 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 TPBGQ13641 420 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 KIAA0141Q14154 515 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-214ENST00000550893 HERPUD1Q15011 391 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 HMGN3Q15651 99 aa3.77□□□□□ -1.81
SCAF11-214ENST00000550893 PNLIPRP3Q17RR3 467 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms