RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 DEFB136Q30KP8 78 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 C2orf76Q3KRA6 126 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 AKIRIN2Q53H80 203 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 CD200R1LQ6Q8B3 271 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 FAM131AQ6UXB0 335 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 ZNF562Q6V9R5 426 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 ZNF429Q86V71 674 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 OR4A4PQ8NGN8 299 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 NRG4Q8WWG1 115 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 ARHGAP5-AS1Q96IT6 56 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 GAB2Q9UQC2 676 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 FOXA2Q9Y261 457 aaPredicted RBP8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 METTL21EPA6NDL7 271 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 FOXI3A8MTJ6 420 aaPredicted RBP8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 ANKRD65E5RJM6 399 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 I3L521 148 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 LDLRAD4O15165 306 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 MRPS14O60783 128 aaKnown RBP8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 APOA2P02652 100 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 SCTP09683 121 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 CD3GP09693 182 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 GALP22466 123 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 GADD45AP24522 165 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 CNTFRP26992 372 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 ECI1P42126 302 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 TMEM50BP56557 158 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 CX3CL1P78423 397 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 FABP5Q01469 135 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 KIAA0141Q14154 515 aaPredicted RBP8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 ARL6IP1Q15041 203 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 TBCEQ15813 527 aaPredicted RBP8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 ZNF260Q3ZCT1 412 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 RPL39P5Q59GN2 51 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 ZNF367Q7RTV3 350 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 C5orf24Q7Z6I8 188 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 PDPNQ86YL7 162 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 RAB3CQ96E17 227 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 ABHD14BQ96IU4 210 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 GFI1Q99684 422 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 PECRQ9BY49 303 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 TOLLIPQ9H0E2 274 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 KLK15Q9H2R5 256 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 KCNK15Q9H427 330 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 FBXL15Q9H469 300 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 SLA2Q9H6Q3 261 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 NUBP2Q9Y5Y2 271 aa8.47□□□□□ -1.05
VTI1BP3-201ENST00000550220 TFAP2AP05549 437 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 RAB6AP20340 208 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 MYL9P24844 172 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 LGALS7P47929 136 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 LUMP51884 338 aaPredicted RBP8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 RPS16P62249 146 aaKnown RBP8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 CBX3Q13185 183 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 SRSF7Q16629 238 aaKnown RBP eCLIP8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 ECSCRQ19T08 205 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 ACTBL2Q562R1 376 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 PPP1R27Q86WC6 154 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 OR10J5Q8NHC4 309 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 ABHD5Q8WTS1 349 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 FLYWCH2Q96CP2 140 aaKnown RBP8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 TMEM68Q96MH6 324 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 HDHD3Q9BSH5 251 aaPredicted RBP8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 RDH8Q9NYR8 311 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 OR1A1Q9P1Q5 309 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 SCOCQ9UIL1 159 aa8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 ZNF256Q9Y2P7 627 aaPredicted RBP8.46□□□□□ -1.06
VTI1BP3-201ENST00000550220 TRDV1A0A1B0GX56 115 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 A0A1W2PN81 502 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 IFITM5A6NNB3 132 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 LINC01619G3V211 115 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 H3BUA1 57 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 FABP7O15540 132 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 CHRNA7P36544 502 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 PSG5Q15238 335 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 C19orf54Q5BKX5 351 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 PLAC9Q5JTB6 97 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 UNQ5815/PRO19632Q6UWF5 114 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 GLDNQ6ZMI3 551 aaPredicted RBP8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 OR10R2Q8NGX6 335 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 WWC2-AS2Q96NR7 200 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 GNB4Q9HAV0 340 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 METTL1Q9UBP6 276 aaKnown RBP8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 RAB26Q9ULW5 256 aa8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 LSM4Q9Y4Z0 139 aaKnown RBP8.45□□□□□ -1.06
VTI1BP3-201ENST00000550220 TMEM272A0A1B0GTI8 110 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 OVOL1O14753 267 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 HSPB1P04792 205 aaKnown RBP8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 LGALS1P09382 135 aaKnown RBP8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 RRASP10301 218 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 RAB3BP20337 219 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 TALDO1P37837 337 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 MAP2K4P45985 399 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 CLDN12P56749 244 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 HES5Q5TA89 166 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 IZUMO2Q6UXV1 221 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 ZNF383Q8NA42 475 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 ARPC1AQ92747 370 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 CYYR1Q96J86 154 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 CNBD2Q96M20 576 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms