RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 V9GY05 133 aa12.35□□□□□ -0.43
COX6A1-203ENST00000550009 NBEAL2Q6ZNJ1 2754 aa12.35□□□□□ -0.43
COX6A1-203ENST00000550009 A0A075B6Q4 140 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 IGKV1D-8A0A087WSZ0 117 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 A0A1W2PN81 502 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 RRHO14718 337 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 DENRO43583 198 aaKnown RBP12.34□□□□□ -0.43
COX6A1-203ENST00000550009 GNB3P16520 340 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 CHRNA7P36544 502 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 SLURP1P55000 103 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 CX3CL1P78423 397 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 SSBP2P81877 361 aaPredicted RBP12.34□□□□□ -0.43
COX6A1-203ENST00000550009 MINDY2Q8NBR6 621 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 URM1Q9BTM9 101 aaKnown RBP12.34□□□□□ -0.43
COX6A1-203ENST00000550009 PIPOXQ9P0Z9 390 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 HSF4Q9ULV5 492 aa12.34□□□□□ -0.43
COX6A1-203ENST00000550009 SEC14L6B5MCN3 397 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 H7C2Y5 167 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 HSPA12AO43301 675 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 GSTT2P0CG29 244 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 GSTT2BP0CG30 244 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 SLC6A1P30531 599 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 ECI1P42126 302 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 RAB9AP51151 201 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 DGCR2P98153 550 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 DEFA5Q01523 94 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 PJVKQ0ZLH3 352 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 TBCEQ15813 527 aaPredicted RBP12.33□□□□□ -0.44
COX6A1-203ENST00000550009 MOB1BQ7L9L4 216 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 OR5AN1Q8NGI8 311 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 OR5M8Q8NGP6 311 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 OR1N2Q8NGR9 330 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 GON7Q9BXV9 100 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 C12orf4Q9NQ89 552 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 RDH8Q9NYR8 311 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 LRRC42Q9Y546 428 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 NUBP2Q9Y5Y2 271 aa12.33□□□□□ -0.44
COX6A1-203ENST00000550009 TRDCB7Z8K6 153 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 ARPC1BO15143 372 aaKnown RBP12.32□□□□□ -0.44
COX6A1-203ENST00000550009 ARL6IP5O75915 188 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 GSTP1P09211 210 aaKnown RBP12.32□□□□□ -0.44
COX6A1-203ENST00000550009 ZBTB25P24278 435 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 PSG5Q15238 335 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 TRAM1Q15629 374 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 ZNF260Q3ZCT1 412 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 C22orf42Q6IC83 251 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 FAM71F2Q6NXP2 309 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 ZNF367Q7RTV3 350 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 DCUN1D4Q92564 292 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 DPF1Q92782 380 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 MS4A10Q96PG2 267 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 MCRIP2Q9BUT9 160 aaKnown RBP12.32□□□□□ -0.44
COX6A1-203ENST00000550009 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 ZNF580Q9UK33 172 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 WASHC3Q9Y3C0 194 aa12.32□□□□□ -0.44
COX6A1-203ENST00000550009 LSM4Q9Y4Z0 139 aaKnown RBP12.32□□□□□ -0.44
COX6A1-203ENST00000550009 IGHV4OR15-8A0A075B7B6 117 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 A0A087WW49 117 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 RAB27BO00194 218 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 BET1O15155 118 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 CA2P00918 260 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 IGHV3-11P01762 117 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 FCGR3AP08637 254 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 CD69Q07108 199 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 PLGLAQ15195 96 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 VAX1Q5SQQ9 334 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 TMEM65Q6PI78 240 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 ABHD5Q8WTS1 349 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 DLX4Q92988 240 aaPredicted RBP12.31□□□□□ -0.44
COX6A1-203ENST00000550009 PTX4Q96A99 478 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 ASCL2Q99929 193 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 B9D2Q9BPU9 175 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 NDUFB11Q9NX14 153 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 METTL1Q9UBP6 276 aaKnown RBP12.31□□□□□ -0.44
COX6A1-203ENST00000550009 RAB22AQ9UL26 194 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 VSIG4Q9Y279 399 aa12.31□□□□□ -0.44
COX6A1-203ENST00000550009 OR5H14A6NHG9 310 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 IFITM5A6NNB3 132 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 J3QRK9 145 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 M0R1X1 148 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 MFNGO00587 321 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 ITGB1BP1O14713 200 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 SLC25A17O43808 307 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 IGLV2-23P01705 113 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 OR8U9P0C7N5 309 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 PSMA1P25786 263 aaKnown RBP12.3□□□□□ -0.44
COX6A1-203ENST00000550009 CRIP2P52943 208 aaPredicted RBP12.3□□□□□ -0.44
COX6A1-203ENST00000550009 MRGPRG-AS1Q2M3A8 158 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 C9orf66Q5T8R8 295 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 CD200R1LQ6Q8B3 271 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 HAPLN4Q86UW8 402 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 LFNGQ8NES3 379 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 OR56B1Q8NGI3 324 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 RAB3CQ96E17 227 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 RIMS4Q9H426 269 aaPredicted RBP12.3□□□□□ -0.44
COX6A1-203ENST00000550009 RNF167Q9H6Y7 350 aa12.3□□□□□ -0.44
COX6A1-203ENST00000550009 TRAV1-2A0A0B4J238 106 aa12.29□□□□□ -0.44
COX6A1-203ENST00000550009 SRRM4A7MD48 611 aaKnown RBP12.29□□□□□ -0.44
COX6A1-203ENST00000550009 FABP7O15540 132 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms