RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 TOLLIPQ9H0E2 274 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 ZNF221Q9UK13 617 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 WASHC3Q9Y3C0 194 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 IGKV1-6A0A0C4DH72 117 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 RRHO14718 337 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 PROP1O75360 226 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 DIRAS3O95661 229 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 IGLV1-40P01703 118 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 GSTP1P09211 210 aaKnown RBP14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 GADD45AP24522 165 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 HOXD3P31249 432 aaPredicted RBP14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 TMEM65Q6PI78 240 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 OR10R2Q8NGX6 335 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 UBE2E2Q96LR5 201 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 Q9H521 79 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 PARP11Q9NR21 331 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 WSB1Q9Y6I7 421 aa14.56□□□□□ -0.08
CHMP1A-207ENST00000549328 TRAV41A0A0B4J266 112 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 METTL21EPA6NDL7 271 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 G3V318 75 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 H7C2Y5 167 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 RAB27BO00194 218 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 FGF9P31371 208 aaPredicted RBP14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 CRIP2P52943 208 aaPredicted RBP14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 DEFB136Q30KP8 78 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 MOGAT2Q3SYC2 334 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 GLDNQ6ZMI3 551 aaPredicted RBP14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 SPARTQ8N0X7 666 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 MINDY2Q8NBR6 621 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 OR5M8Q8NGP6 311 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 FCGR1BQ92637 280 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 CENPOQ9BU64 300 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 FBXL15Q9H469 300 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 RDH8Q9NYR8 311 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 RNF150Q9ULK6 438 aa14.55□□□□□ -0.08
CHMP1A-207ENST00000549328 WI2-2373I1.2A0A1W2PRP0 233 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 MFNGO00587 321 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 FABP7O15540 132 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 FCGR3AP08637 254 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 CX3CL1P78423 397 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 RUNX1Q01196 453 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 FHL3Q13643 280 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 KIAA0141Q14154 515 aaPredicted RBP14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 C22orf42Q6IC83 251 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 ZNF491Q8N8L2 437 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 KLK15Q9H2R5 256 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 GAB2Q9UQC2 676 aa14.54□□□□□ -0.08
CHMP1A-207ENST00000549328 TFAP2AP05549 437 aa14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 HIST1H1DP16402 221 aaKnown RBP14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 RAB9AP51151 201 aa14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 RAB25P57735 213 aa14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 TMEM267Q0VDI3 215 aaPredicted RBP14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 ARL6IP1Q15041 203 aa14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 PLGLAQ15195 96 aa14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 SRSF7Q16629 238 aaKnown RBP eCLIP14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 C19orf54Q5BKX5 351 aa14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 TCTEX1D1Q8N7M0 179 aa14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 DRAXINQ8NBI3 349 aaPredicted RBP14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 TSNAXQ99598 290 aaKnown RBP14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 CABLES2Q9BTV7 478 aa14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 VSIG4Q9Y279 399 aa14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 NUBP2Q9Y5Y2 271 aa14.53□□□□□ -0.08
CHMP1A-207ENST00000549328 DNAH3Q8TD57 4116 aa14.52□□□□□ -0.08
CHMP1A-207ENST00000549328 TRBV6-7A0A0A0MS04 114 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 I3L521 148 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 FCN1O00602 326 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 SPDEFO95238 335 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 GNB3P16520 340 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 NDPQ00604 133 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 DEFB121Q5J5C9 76 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 ZNF562Q6V9R5 426 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 Q6ZS49 121 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 TPRA1Q86W33 373 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 NR2C2APQ86WQ0 139 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 PDPNQ86YL7 162 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 ZNF383Q8NA42 475 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 OR11H1Q8NG94 326 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 OR10J5Q8NHC4 309 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 FBXO7Q9Y3I1 522 aa14.52□□□□□ -0.09
CHMP1A-207ENST00000549328 NOTOA8MTQ0 251 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 BET1O15155 118 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 RAMP3O60896 148 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 APOA2P02652 100 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 IGKV1-16P04430 117 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 GSTT2P0CG29 244 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 GSTT2BP0CG30 244 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 PSMB9P28065 219 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 DCTN2Q13561 401 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 PSG5Q15238 335 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 IGSF11Q5DX21 431 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 C9orf66Q5T8R8 295 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 FLYWCH2Q96CP2 140 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 TXNL4BQ9NX01 149 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 METTL1Q9UBP6 276 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 STUB1Q9UNE7 303 aa14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 FOXA2Q9Y261 457 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-207ENST00000549328 A0A075B6Q4 140 aa14.5□□□□□ -0.09
CHMP1A-207ENST00000549328 A0A0B4J203 849 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms