RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	DHRS13	Q6UX07	377 aa		11	□□□□□ -0.65
BRF1-210	ENST00000547374	RPP25L	Q8N5L8	163 aa	Known RBP	11	□□□□□ -0.65
BRF1-210	ENST00000547374	ZNF525	Q8N782	197 aa		11	□□□□□ -0.65
BRF1-210	ENST00000547374	SCCPDH	Q8NBX0	429 aa		11	□□□□□ -0.65
BRF1-210	ENST00000547374	SSMEM1	Q8WWF3	244 aa		11	□□□□□ -0.65
BRF1-210	ENST00000547374	HEYL	Q9NQ87	328 aa	Predicted RBP	11	□□□□□ -0.65
BRF1-210	ENST00000547374	VAX2	Q9UIW0	290 aa		11	□□□□□ -0.65
BRF1-210	ENST00000547374		A0A1B0GU03	582 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	SLC25A6	P12236	298 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	HOXC12	P31275	282 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	FAM90A2P	Q658T7	463 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	FOXL2NB	Q6ZUU3	175 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	LEAP2	Q969E1	77 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	ATG101	Q9BSB4	218 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	PRDM14	Q9GZV8	571 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	ARRDC1-AS1	Q9H2J1	176 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	LIN7C	Q9NUP9	197 aa	Known RBP	10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	CEP192	Q8TEP8	1941 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	LRP5L	A4QPB2	252 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	DAZAP2	Q15038	168 aa	Predicted RBP	10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	RIPPLY2	Q5TAB7	128 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	SLC35E3	Q7Z769	313 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	DEFB108B	Q8NET1	73 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	OR51I2	Q9H344	312 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	MGA	Q8IWI9	3026 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	SH2D1B	O14796	132 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	IGKV1D-33	P01593	117 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	IGKV1-33	P01594	117 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	MEF2B	Q02080	365 aa	Predicted RBP	10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	ZNF324B	Q6AW86	544 aa	Predicted RBP	10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	ZNF600	Q6ZNG1	722 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	HIST3H2BB	Q8N257	126 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	OR4X1	Q8NH49	305 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	SLC25A40	Q8TBP6	338 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	WDYHV1	Q96HA8	205 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	FAM173A	Q9BQD7	235 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	RTL8A	Q9BWD3	113 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	PARL	Q9H300	379 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	PLSCR2	Q9NRY7	297 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	FOXJ2	Q9P0K8	574 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	RNF115	Q9Y4L5	304 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	DMRT1	Q9Y5R6	373 aa		10.99	□□□□□ -0.65
BRF1-210	ENST00000547374	FCGR3B	O75015	233 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	ACTL6B	O94805	426 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	CYB5R3	P00387	301 aa	Predicted RBP	10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	MEOX1	P50221	254 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	OR5P3	Q8WZ94	311 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	RAB24	Q969Q5	203 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	GALM	Q96C23	342 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	TIMM8A	O60220	97 aa	Predicted RBP	10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	PTBP3	O95758	552 aa	Known RBP	10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	CER1	O95813	267 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	RAB4B	P61018	213 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	SLC10A1	Q14973	349 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	ACSM6	Q6P461	480 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	ASCL4	Q6XD76	172 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	HAPLN4	Q86UW8	402 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	CFAP47	Q6ZTR5	3102 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	C17orf98	A8MV24	154 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	ARR3	P36575	388 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	STRADB	Q9C0K7	418 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	IL36G	Q9NZH8	169 aa		10.98	□□□□□ -0.65
BRF1-210	ENST00000547374	MPL	P40238	635 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	RPL30	P62888	115 aa	Known RBP	10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	TBC1D28	Q2M2D7	210 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	ABLIM2	Q6H8Q1	611 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	MALSU1	Q96EH3	234 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	POM121L2	Q96KW2	1035 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	WDR61	Q9GZS3	305 aa	Known RBP	10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	SDF2L1	Q9HCN8	221 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	GCM1	Q9NP62	436 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	INTS1	Q8N201	2190 aa	Known RBP	10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	ZNF729	A6NN14	1252 aa	Predicted RBP	10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	PPP1CB	P62140	327 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	SLC35B1	P78383	322 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	MSMO1	Q15800	293 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	TMEM41B	Q5BJD5	291 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	MRGPRG	Q86SM5	289 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	DTD1	Q8TEA8	209 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	IL22RA2	Q969J5	263 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	HIST1H2BL	Q99880	126 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	YLPM1	P49750	1951 aa	Known RBP	10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	BDP1	A6H8Y1	2624 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	GRIFIN	A4D1Z8	144 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	PSPN	O60542	156 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	NDUFB4	O95168	129 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	DDT	P30046	118 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	MRPL49	Q13405	166 aa	Known RBP	10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	SSPN	Q14714	243 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	TECTB	Q96PL2	329 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	DERL1	Q9BUN8	251 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	NCKAP5	O14513	1909 aa		10.97	□□□□□ -0.65
BRF1-210	ENST00000547374	C11orf94	C9JXX5	98 aa		10.96	□□□□□ -0.65
BRF1-210	ENST00000547374	NEURL1	O76050	574 aa		10.96	□□□□□ -0.65
BRF1-210	ENST00000547374	LHX2	P50458	406 aa		10.96	□□□□□ -0.65
BRF1-210	ENST00000547374	PRAMEF5	Q5TYX0	476 aa		10.96	□□□□□ -0.65
BRF1-210	ENST00000547374	TRIB1	Q96RU8	372 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms