RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 HSPB6O14558 160 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 DHHO43323 396 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 HNF1AP20823 631 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 CBLN1P23435 193 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 KIR2DS4P43632 304 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 BPIFB3P59826 476 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 KRTDAPP60985 99 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 UBE2V1Q13404 147 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 KIR2DS1Q14954 304 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 ATP6V1FQ16864 119 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 TMEM42Q69YG0 159 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 Q6ZN92 141 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 ZDHHC23Q8IYP9 409 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 ZNF611Q8N823 705 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 PIGCQ92535 297 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 SFRP2Q96HF1 295 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 RNF2Q99496 336 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 EXPH5Q8NEV8 1989 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 CNTRLQ7Z7A1 2325 aa9.08□□□□□ -0.96
NPAS3-205ENST00000547068 MDFIC2A0A1B0GVS7 189 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 TMPRSS2O15393 492 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 CBR3O75828 277 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 NAPSAO96009 420 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 CRYAAP02489 173 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 CTXN2P0C2S0 81 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 DUSP3P51452 185 aaPredicted RBP9.07□□□□□ -0.96
NPAS3-205ENST00000547068 HNRNPA3P51991 378 aaKnown RBP9.07□□□□□ -0.96
NPAS3-205ENST00000547068 SRSF7Q16629 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
NPAS3-205ENST00000547068 RNF151Q2KHN1 245 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 FFAR4Q5NUL3 377 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 SIGLECL1Q8N7X8 197 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 LSM10Q969L4 123 aaKnown RBP9.07□□□□□ -0.96
NPAS3-205ENST00000547068 ALKBH3Q96Q83 286 aaPredicted RBP9.07□□□□□ -0.96
NPAS3-205ENST00000547068 ALKBH7Q9BT30 221 aaPredicted RBP9.07□□□□□ -0.96
NPAS3-205ENST00000547068 FAM103A1Q9BTL3 118 aaKnown RBP9.07□□□□□ -0.96
NPAS3-205ENST00000547068 FBXL7Q9UJT9 491 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 LOC102725191A0A1B0GVB3 256 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 PGPEP1LA6NFU8 196 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 KITLGP21583 273 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 CRYGSP22914 178 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 CTRLP40313 264 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 GNB1P62873 340 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 C1orf174Q8IYL3 243 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 TMEM54Q969K7 222 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 DERL1Q9BUN8 251 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 MRPL18Q9H0U6 180 aaKnown RBP9.07□□□□□ -0.96
NPAS3-205ENST00000547068 METTL7AQ9H8H3 244 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 ATP23Q9Y6H3 246 aa9.07□□□□□ -0.96
NPAS3-205ENST00000547068 LILRA5A6NI73 299 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 PDE6DO43924 150 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 NDUFB4O95168 129 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 IGKV1-39P01597 117 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 IGKV1D-39P04432 117 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 COX5AP20674 150 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 RHBDD2Q6NTF9 364 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 FOXL2NBQ6ZUU3 175 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 LYG1Q8N1E2 194 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 ZNF114Q8NC26 417 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 PSMF1Q92530 271 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 STARD4Q96DR4 205 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 ZNF586Q9NXT0 402 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 F2Z2F3 143 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 F6UZH7 168 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 RBFOX2O43251 390 aaKnown RBP eCLIP9.06□□□□□ -0.96
NPAS3-205ENST00000547068 HYPMO75409 117 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 CLDN1O95832 211 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 IGKV1-5P01602 117 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 BMP5P22003 454 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 ARL4DP49703 201 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 RIPPLY2Q5TAB7 128 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 ZNF738Q8NE65 137 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 OR1L3Q8NH93 324 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 OR5P3Q8WZ94 311 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 APH1AQ96BI3 265 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 OR6C1Q96RD1 312 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 ULBP2Q9BZM5 246 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 ZNF703Q9H7S9 590 aaPredicted RBP9.06□□□□□ -0.96
NPAS3-205ENST00000547068 OR2W1Q9Y3N9 320 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 RNF114Q9Y508 228 aa9.06□□□□□ -0.96
NPAS3-205ENST00000547068 NPIPA2E9PIF3 369 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 NPIPA3F8WFD2 350 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 CDX4O14627 284 aaPredicted RBP9.05□□□□□ -0.96
NPAS3-205ENST00000547068 SYNGR3O43761 229 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 IGLC2P0DOY2 106 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 IGLC3P0DOY3 106 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 DEFA4P12838 97 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 UBE2G2P60604 165 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 ZNF90Q03938 601 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 Q6ZVH6 145 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 Q8N976 141 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 ZNF501Q96CX3 271 aaPredicted RBP9.05□□□□□ -0.96
NPAS3-205ENST00000547068 ZNF837Q96EG3 531 aaPredicted RBP9.05□□□□□ -0.96
NPAS3-205ENST00000547068 ERRFI1Q9UJM3 462 aaPredicted RBP9.05□□□□□ -0.96
NPAS3-205ENST00000547068 IGHV3-15A0A0B4J1V0 119 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 TRAV34A0A0B4J273 112 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 ZNF816-ZNF321PA0A0X1KG74 233 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 FAM90A10PA6NDY2 464 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 FAM90A18PA6NE21 464 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 FAM90A16PA6NEW6 464 aa9.05□□□□□ -0.96
NPAS3-205ENST00000547068 FAM90A20PA6NIJ5 464 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms