RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 MRGPRGQ86SM5 289 aa13.28□□□□□ -0.28
LDLR-204ENST00000545707 HIST3H2BBQ8N257 126 aa13.28□□□□□ -0.28
LDLR-204ENST00000545707 MDS2Q8NDY4 140 aa13.28□□□□□ -0.28
LDLR-204ENST00000545707 NANOS1Q8WY41 292 aaKnown RBP13.28□□□□□ -0.28
LDLR-204ENST00000545707 CDH20Q9HBT6 801 aa13.28□□□□□ -0.28
LDLR-204ENST00000545707 OBP2BQ9NPH6 170 aa13.28□□□□□ -0.28
LDLR-204ENST00000545707 TREM2Q9NZC2 230 aa13.28□□□□□ -0.28
LDLR-204ENST00000545707 COLQQ9Y215 455 aaPredicted RBP13.28□□□□□ -0.28
LDLR-204ENST00000545707 POLDIP2Q9Y2S7 368 aa13.28□□□□□ -0.28
LDLR-204ENST00000545707 WIPI2Q9Y4P8 454 aa13.28□□□□□ -0.28
LDLR-204ENST00000545707 TECTAO75443 2155 aa13.27□□□□□ -0.28
LDLR-204ENST00000545707 IGHV3-43A0A0B4J1X8 118 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 AGFG2O95081 481 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 WNT2P09544 360 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 IGHV3-43DP0DP04 118 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 FABP4P15090 132 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 DBX2Q6ZNG2 339 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 RFESDQ8TAC1 157 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 MRGPRDQ8TDS7 321 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 PLPPR2Q96GM1 343 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 SMIM7Q9BQ49 75 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 RYDENQ9NUL5 291 aaKnown RBP13.27□□□□□ -0.29
LDLR-204ENST00000545707 KLF13Q9Y2Y9 288 aaPredicted RBP13.27□□□□□ -0.29
LDLR-204ENST00000545707 TRGV5A0A0B4J1U4 118 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 ODAMA1E959 279 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 DEFB108AA8MXU0 73 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 ZG16O60844 167 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 IGHV1-2P23083 117 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 IL2RGP31785 369 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 DHRS13Q6UX07 377 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 TMEM14EPQ6UXP3 125 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 SNX22Q96L94 193 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 GUCD1Q96NT3 240 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 UFSP2Q9NUQ7 469 aa13.27□□□□□ -0.29
LDLR-204ENST00000545707 RND2P52198 227 aa13.26□□□□□ -0.29
LDLR-204ENST00000545707 TFF3Q07654 80 aa13.26□□□□□ -0.29
LDLR-204ENST00000545707 PNRC1Q12796 327 aaPredicted RBP13.26□□□□□ -0.29
LDLR-204ENST00000545707 Q8IYB0 196 aa13.26□□□□□ -0.29
LDLR-204ENST00000545707 KCNIP1Q9NZI2 227 aa13.26□□□□□ -0.29
LDLR-204ENST00000545707 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
LDLR-204ENST00000545707 SEC14L6B5MCN3 397 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 C21orf140B9A014 251 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 RBMXL2O75526 392 aaKnown RBP13.25□□□□□ -0.29
LDLR-204ENST00000545707 LY86O95711 162 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 HBZP02008 142 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 UBE2NP61088 152 aaKnown RBP13.25□□□□□ -0.29
LDLR-204ENST00000545707 ARG2P78540 354 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 RTP5Q14D33 572 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 ZNF645Q8N7E2 425 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 GALMQ96C23 342 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 PIGBOS1A0A0B4J2F0 54 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 MLNRO43193 412 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 BMP5P22003 454 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 TUBG1P23258 451 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 GABRA2P47869 451 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 MEF2BQ02080 365 aaPredicted RBP13.25□□□□□ -0.29
LDLR-204ENST00000545707 LTC4SQ16873 150 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 ZNF766Q5HY98 468 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 PRAMEF6Q5VXH4 476 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 KLF14Q8TD94 323 aaPredicted RBP13.25□□□□□ -0.29
LDLR-204ENST00000545707 PINX1Q96BK5 328 aaKnown RBP13.25□□□□□ -0.29
LDLR-204ENST00000545707 PFDN5Q99471 154 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 DCTN5Q9BTE1 182 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 HSPB7Q9UBY9 170 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 DMRT1Q9Y5R6 373 aa13.25□□□□□ -0.29
LDLR-204ENST00000545707 OR5H1A6NKK0 313 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 SSTR5P35346 364 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 C16orf82Q7Z2V1 217 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 P2RX4Q99571 388 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 LRRC30A6NM36 301 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 TNFSF15O95150 251 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 CD46P15529 392 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 FGF7P21781 194 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 OR10G9Q8NGN4 311 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 OR10G7Q8NGN6 311 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 COQ2Q96H96 371 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 BDP1A6H8Y1 2624 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 LAMA5O15230 3695 aa13.24□□□□□ -0.29
LDLR-204ENST00000545707 TMEM30CPA0ZSE6 113 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 PHOX2AO14813 284 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 RAC2P15153 192 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 MRPL49Q13405 166 aaKnown RBP13.23□□□□□ -0.29
LDLR-204ENST00000545707 FFAR4Q5NUL3 377 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 NCR3LG1Q68D85 454 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 C11orf53Q8IXP5 236 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 OR5T1Q8NG75 326 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 OR13D1Q8NGV5 346 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 ELOVL1Q9BW60 279 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 MSL2Q9HCI7 577 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 TMEM242Q9NWH2 141 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 GAB2Q9UQC2 676 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 LINC00473A8K010 186 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 RNF212BA8MTL3 300 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 IFNA1P01562 189 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 TMEM241Q24JQ0 296 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 OR4F5Q8NH21 305 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 DTD1Q8TEA8 209 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 OR4F4Q96R69 305 aa13.23□□□□□ -0.29
LDLR-204ENST00000545707 ZMAT5Q9UDW3 170 aaKnown RBP13.23□□□□□ -0.29
LDLR-204ENST00000545707 PMS2P5A8MQ11 134 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms