RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ZNF93P35789 620 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 RPL5P46777 297 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 TPPP2P59282 170 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 FABP5Q01469 135 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 GPR176Q14439 515 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 DDI2Q5TDH0 399 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 SLC16A12Q6ZSM3 486 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 PXT1Q8NFP0 134 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 UBALD1Q8TB05 177 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 SLC2A8Q9NY64 477 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 GHRLQ9UBU3 117 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 SLC23A1Q9UHI7 598 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 MSGN1A6NI15 193 aa11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 SLC31A2O15432 143 aa11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 TMEM127O75204 238 aa11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 CALRP27797 417 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 PDZK1IP1Q13113 114 aa11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 CD300EQ496F6 205 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 TMEM91Q6ZNR0 172 aa11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 GPR141Q7Z602 305 aa11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 TPRA1Q86W33 373 aa11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 OR51T1Q8NGJ9 327 aa11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 RANGRFQ9HD47 186 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-216ENST00000545663 A0A1W2PPK0 400 aa11.52□□□□□ -0.57
CLSTN3-216ENST00000545663 DEGS1O15121 323 aa11.52□□□□□ -0.57
CLSTN3-216ENST00000545663 NDUFB8O95169 186 aa11.52□□□□□ -0.57
CLSTN3-216ENST00000545663 UBBP0CG47 229 aa11.52□□□□□ -0.57
CLSTN3-216ENST00000545663 TMEM225BP0DP42 221 aa11.52□□□□□ -0.57
CLSTN3-216ENST00000545663 ZP3P21754 424 aa11.52□□□□□ -0.57
CLSTN3-216ENST00000545663 LIN54Q6MZP7 749 aa11.52□□□□□ -0.57
CLSTN3-216ENST00000545663 OR13F1Q8NGS4 319 aa11.52□□□□□ -0.57
CLSTN3-216ENST00000545663 RFT1Q96AA3 541 aa11.52□□□□□ -0.57
CLSTN3-216ENST00000545663 TRAV8-7A0A075B6U6 113 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 AIREO43918 545 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 MAS1P04201 325 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 ALDH3B2P48448 385 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 ACTBP60709 375 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 ZNF45Q02386 682 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 CROCCP3Q8IVE0 287 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 JAGN1Q8N5M9 183 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 OR51A2Q8NGJ7 313 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 TNFAIP8L1Q8WVP5 186 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 RNF183Q96D59 192 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 YIPF6Q96EC8 236 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 MRPS24Q96EL2 167 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 BCL7BQ9BQE9 202 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 GGTLC1Q9BX51 225 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 METTL9Q9H1A3 318 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 TXNL4BQ9NX01 149 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 IL36GQ9NZH8 169 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 NUBP2Q9Y5Y2 271 aa11.51□□□□□ -0.57
CLSTN3-216ENST00000545663 IGHV3-43A0A0B4J1X8 118 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 KDM4BO94953 1096 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 CSTBP04080 98 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 IGHV3-43DP0DP04 118 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 CD37P11049 281 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 RSU1Q15404 277 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 C22orf42Q6IC83 251 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 ASCL4Q6XD76 172 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 WFDC3Q8IUB2 231 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 LINC00311Q8N616 119 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 CHST4Q8NCG5 386 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 OR10A7Q8NGE5 316 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 OR6M1Q8NGM8 313 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 PLPPR1Q8TBJ4 325 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 FAM103A1Q9BTL3 118 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 SELENOKQ9Y6D0 94 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 V9GY05 133 aa11.5□□□□□ -0.57
CLSTN3-216ENST00000545663 LRP1BQ9NZR2 4599 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 SRRM2Q9UQ35 2752 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 LOC100506127A0A0U1RQW1 187 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 FCN1O00602 326 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 NOL3O60936 208 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 BPNT1O95861 308 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 TRBV12-3P01733 135 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 TRGV3P03979 118 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 RAB3BP20337 219 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 GADD45AP24522 165 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 CX3CL1P78423 397 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 LSAMPQ13449 338 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 INSL4Q14641 139 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 GUCA2BQ16661 112 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 C1orf100Q5SVJ3 147 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 ELP2Q6IA86 826 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 LRRTM1Q86UE6 522 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 FUNDC2Q9BWH2 189 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 FAM192AQ9GZU8 254 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 CST11Q9H112 138 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 OR51E2Q9H255 320 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 PLGRKTQ9HBL7 147 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 GAB2Q9UQC2 676 aa11.49□□□□□ -0.57
CLSTN3-216ENST00000545663 TRAV24A0A0B4J272 114 aa11.48□□□□□ -0.57
CLSTN3-216ENST00000545663 SDCBPO00560 298 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-216ENST00000545663 NBR2O15453 112 aa11.48□□□□□ -0.57
CLSTN3-216ENST00000545663 SPRY2O43597 315 aa11.48□□□□□ -0.57
CLSTN3-216ENST00000545663 ATF4P18848 351 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-216ENST00000545663 IL3RAP26951 378 aa11.48□□□□□ -0.57
CLSTN3-216ENST00000545663 HTR2CP28335 458 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms