RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 TMEM210A6NLX4 147 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 GALR2O43603 387 aaPredicted RBP11.56□□□□□ -0.56
VPS33A-208ENST00000543633 LCN2P80188 198 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 COL10A1Q03692 680 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 C4orf17Q53FE4 359 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 ZNF318Q5VUA4 2279 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 SSX9Q7RTT3 188 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 MCEMP1Q8IX19 187 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 CISD2Q8N5K1 135 aaKnown RBP11.56□□□□□ -0.56
VPS33A-208ENST00000543633 BCL2L2Q92843 193 aaPredicted RBP11.56□□□□□ -0.56
VPS33A-208ENST00000543633 NEIL1Q96FI4 390 aaPredicted RBP11.56□□□□□ -0.56
VPS33A-208ENST00000543633 THOC3Q96J01 351 aaKnown RBP11.56□□□□□ -0.56
VPS33A-208ENST00000543633 DIRC2Q96SL1 478 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 KCNIP1Q9NZI2 227 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 CHD3Q12873 2000 aaKnown RBP11.56□□□□□ -0.56
VPS33A-208ENST00000543633 TMEM30CPA0ZSE6 113 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 LNP1A1A4G5 178 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 LRRC30A6NM36 301 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 PMS2P5A8MQ11 134 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 C17orf112F2Z3M2 114 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 SIRPB1O00241 398 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 RAB29O14966 203 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 ZNF883P0CG24 379 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 RAC2P15153 192 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 ACTL10Q5JWF8 245 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 ABHD17BQ5VST6 288 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 BEND4Q6ZU67 534 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 SCCPDHQ8NBX0 429 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 OR10P1Q8NGE3 313 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 OR10G9Q8NGN4 311 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 OR10G7Q8NGN6 311 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 TTTY12Q9BZ98 90 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 CLDN14O95500 239 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 MDKP21741 143 aaPredicted RBP11.55□□□□□ -0.56
VPS33A-208ENST00000543633 ACP1P24666 158 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 TBC1D28Q2M2D7 210 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 SPINK14Q6IE38 97 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 OR8G2PQ6IF36 304 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 KCNIP4Q6PIL6 250 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 WDR31Q8NA23 367 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 RPUSD4Q96CM3 377 aaKnown RBP11.55□□□□□ -0.56
VPS33A-208ENST00000543633 TAAR6Q96RI8 345 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 DDA1Q9BW61 102 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 SLC25A22Q9H936 323 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 CHODLQ9H9P2 273 aa11.55□□□□□ -0.56
VPS33A-208ENST00000543633 NXPH2O95156 264 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 MT-CO3P00414 261 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 GYPAP02724 150 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 CELA3AP09093 270 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 GZMBP10144 247 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 CCKARP32238 428 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
VPS33A-208ENST00000543633 IGFBP7Q16270 282 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 FFAR4Q5NUL3 377 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 SLC35E4Q6ICL7 350 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 TIPARPQ7Z3E1 657 aaKnown RBP11.54□□□□□ -0.56
VPS33A-208ENST00000543633 WDR86Q86TI4 376 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 ZNF709Q8N972 641 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 BEND2Q8NDZ0 799 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 FAM216AQ8WUB2 273 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 RAB1CQ92928 201 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 IMMP2LQ96T52 175 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 TXNDC17Q9BRA2 123 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 C2orf88Q9BSF0 95 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 HES4Q9HCC6 221 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 LOXL2Q9Y4K0 774 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 CFAP54Q96N23 3096 aa11.54□□□□□ -0.56
VPS33A-208ENST00000543633 ODAMA1E959 279 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 XKRY2A2RUG3 117 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 OOEPA6NGQ2 149 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 ZNF891A8MT65 544 aaPredicted RBP11.53□□□□□ -0.56
VPS33A-208ENST00000543633 TMPRSS2O15393 492 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 PDE6DO43924 150 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 IL18BPO95998 194 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 SELEP16581 610 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 MAGEA5P43359 124 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 GNB2P62879 340 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 MDP1Q86V88 176 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 PRR18Q8N4B5 295 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 TMEM251Q8N6I4 163 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 OR2T10Q8NGZ9 312 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 DTD1Q8TEA8 209 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 GALMQ96C23 342 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 RHOVQ96L33 236 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 NPCDR1Q9BY65 106 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 DOCK10Q96BY6 2186 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 ESPL1Q14674 2120 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 FREM1Q5H8C1 2179 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 IQCF6A8MYZ5 107 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 C1QTNF9BB2RNN3 333 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 SLC31A2O15432 143 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 MLNRO43193 412 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 CD55P08174 381 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 JMJD7P0C870 316 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 GZMHP20718 246 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 TAS2R60P59551 318 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 OR1C1Q15619 314 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 FBXW9Q5XUX1 488 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 ZNF66Q6ZN08 573 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 OR4F5Q8NH21 305 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms