RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 THNSL2Q86YJ6 484 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 RFESDQ8TAC1 157 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 TCTEX1D2Q8WW35 142 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 DCTN5Q9BTE1 182 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 SMDT1Q9H4I9 107 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 ZGRF1Q86YA3 2104 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 USP24Q9UPU5 2620 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 MEX3AA1L020 520 aaKnown RBP11.61□□□□□ -0.55
MSH2-206ENST00000543555 SPINT2O43291 252 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 KRASP01116 189 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 G6PCP35575 357 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 KLF3P57682 345 aaPredicted RBP11.61□□□□□ -0.55
MSH2-206ENST00000543555 BRWD1-AS2P59051 145 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 BTNL3Q6UXE8 466 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 ETV3LQ6ZN32 361 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 GCSAMQ8N6F7 178 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 ZNF525Q8N782 197 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 KDF1Q8NAX2 398 aaPredicted RBP11.61□□□□□ -0.55
MSH2-206ENST00000543555 OR2V2Q96R30 315 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 RARRES2Q99969 163 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 SFXN3Q9BWM7 321 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 KIAA1456Q9P272 454 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 C17orf98A8MV24 154 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 S1PR2O95136 353 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 HTD2P86397 168 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 AKIRIN2Q53H80 203 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 TCTEX1D1Q8N7M0 179 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 MEGF10Q96KG7 1140 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 HIPK2Q9H2X6 1198 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 SMCO4Q9NRQ5 59 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 RBFOX3A6NFN3 312 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 CLDN1O95832 211 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 ADH4P08319 380 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 CEACAM8P31997 349 aaPredicted RBP11.6□□□□□ -0.55
MSH2-206ENST00000543555 HBG1P69891 147 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 HBG2P69892 147 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 TLE4Q04727 773 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 AWAT1Q58HT5 328 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 SPRNQ5BIV9 151 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 SPANXN5Q5MJ07 72 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 SEBOXQ9HB31 216 aaPredicted RBP11.6□□□□□ -0.55
MSH2-206ENST00000543555 HSPB7Q9UBY9 170 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 VHLLQ6RSH7 139 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 ZNF66Q6ZN08 573 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 FAM57AQ8TBR7 257 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 RBKSQ9H477 322 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 PSG11Q9UQ72 335 aa11.6□□□□□ -0.55
MSH2-206ENST00000543555 IGHV3OR15-7A0A075B7D8 119 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 ODAMA1E959 279 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 DEFB108AA8MXU0 73 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 MKRN2OSH3BPM6 223 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 ST8SIA5O15466 376 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 OR13C7P0DN81 318 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 AKR1C3P42330 323 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 KRTCAP3Q53RY4 240 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 PRR30Q53SZ7 412 aaPredicted RBP11.59□□□□□ -0.55
MSH2-206ENST00000543555 MOGAT3Q86VF5 341 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 SFT2D1Q8WV19 159 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 SNX22Q96L94 193 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 AIFM2Q9BRQ8 373 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 AGMATQ9BSE5 352 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 RSG1Q9BU20 258 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 RPS10P5Q9NQ39 176 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 MLXQ9UH92 298 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 IGLV3-9A0A075B6K5 115 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 MGST3O14880 152 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 Q3ZCU0 254 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 LILRB2Q8N423 598 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 PPP1R35Q8TAP8 253 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 RXFP4Q8TDU9 374 aa11.59□□□□□ -0.55
MSH2-206ENST00000543555 LRRC30A6NM36 301 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 PPIHO43447 177 aaKnown RBP11.58□□□□□ -0.56
MSH2-206ENST00000543555 SPRY3O43610 288 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 CLDN14O95500 239 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 GZMHP20718 246 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 LTC4SQ16873 150 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 TMEM14EPQ6UXP3 125 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 HSD17B10Q99714 261 aaKnown RBP11.58□□□□□ -0.56
MSH2-206ENST00000543555 PSMG3Q9BT73 122 aaPredicted RBP11.58□□□□□ -0.56
MSH2-206ENST00000543555 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.58□□□□□ -0.56
MSH2-206ENST00000543555 C7orf77A4D0Y5 90 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 LINC00473A8K010 186 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 COLCA2A8K830 154 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 M0R036 132 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 HBE1P02100 147 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 SNRNP70P08621 437 aaKnown RBP11.58□□□□□ -0.56
MSH2-206ENST00000543555 PAX6P26367 422 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 TMPRSS3P57727 454 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 LY6DQ14210 128 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 LRRC75BQ2VPJ9 315 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 CISD2Q8N5K1 135 aaKnown RBP11.58□□□□□ -0.56
MSH2-206ENST00000543555 CD300LFQ8TDQ1 290 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 EDARADDQ8WWZ3 215 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 LAMP3Q9UQV4 416 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 CHD3Q12873 2000 aaKnown RBP11.58□□□□□ -0.56
MSH2-206ENST00000543555 IGSF10Q6WRI0 2623 aa11.58□□□□□ -0.56
MSH2-206ENST00000543555 A8MXE2 369 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 RAB29O14966 203 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms