RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 CYYR1Q96J86 154 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 OR5B12Q96R08 314 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 CCDC90BQ9GZT6 254 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 VCX3BQ9H321 246 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 FBXL15Q9H469 300 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 ACOT13Q9NPJ3 140 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 SCOCQ9UIL1 159 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 LSM4Q9Y4Z0 139 aaKnown RBP10.2□□□□□ -0.78
RTN3-213ENST00000543552 A0A0A6YYD4 124 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 LINC01619G3V211 115 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 OVOL1O14753 267 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 ARPC1BO15143 372 aaKnown RBP10.19□□□□□ -0.78
RTN3-213ENST00000543552 CALRP27797 417 aaKnown RBP10.19□□□□□ -0.78
RTN3-213ENST00000543552 AQP4P55087 323 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 GNB1P62873 340 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 KIAA0141Q14154 515 aaPredicted RBP10.19□□□□□ -0.78
RTN3-213ENST00000543552 AKIRIN2Q53H80 203 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 ACTBL2Q562R1 376 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 C19orf54Q5BKX5 351 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 PPP1R27Q86WC6 154 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 PDPNQ86YL7 162 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.19□□□□□ -0.78
RTN3-213ENST00000543552 ARHGAP5-AS1Q96IT6 56 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 CMSS1Q9BQ75 279 aaKnown RBP10.19□□□□□ -0.78
RTN3-213ENST00000543552 AGMATQ9BSE5 352 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 C11orf54Q9H0W9 315 aaPredicted RBP10.19□□□□□ -0.78
RTN3-213ENST00000543552 DUSP21Q9H596 190 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 SLA2Q9H6Q3 261 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 Q9N2K0 584 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 OR1A1Q9P1Q5 309 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 METTL1Q9UBP6 276 aaKnown RBP10.19□□□□□ -0.78
RTN3-213ENST00000543552 A3GALT2U3KPV4 340 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 U3KQK5 164 aa10.19□□□□□ -0.78
RTN3-213ENST00000543552 TFAP2AP05549 437 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 LGALS1P09382 135 aaKnown RBP10.18□□□□□ -0.78
RTN3-213ENST00000543552 VEGFCP49767 419 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 RPS25P62851 125 aaKnown RBP10.18□□□□□ -0.78
RTN3-213ENST00000543552 NDPQ00604 133 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 CBX3Q13185 183 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 ZNF562Q6V9R5 426 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 GLDNQ6ZMI3 551 aaPredicted RBP10.18□□□□□ -0.78
RTN3-213ENST00000543552 TMEM91Q6ZNR0 172 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 PRSS48Q7RTY5 328 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 OR4A4PQ8NGN8 299 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 FAM3DQ96BQ1 224 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 HDHD3Q9BSH5 251 aaPredicted RBP10.18□□□□□ -0.78
RTN3-213ENST00000543552 CENPOQ9BU64 300 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 TOLLIPQ9H0E2 274 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 PARP12Q9H0J9 701 aaKnown RBP10.18□□□□□ -0.78
RTN3-213ENST00000543552 BLOC1S6Q9UL45 172 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 AK6Q9Y3D8 172 aaKnown RBP10.18□□□□□ -0.78
RTN3-213ENST00000543552 SMAD5-AS1Q9Y6J3 95 aa10.18□□□□□ -0.78
RTN3-213ENST00000543552 FOXI3A8MTJ6 420 aaPredicted RBP10.17□□□□□ -0.78
RTN3-213ENST00000543552 TRDCB7Z8K6 153 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 PDCD5O14737 125 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 DENRO43583 198 aaKnown RBP10.17□□□□□ -0.78
RTN3-213ENST00000543552 SAP30O75446 220 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 DIRAS3O95661 229 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 SCTP09683 121 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 CD3GP09693 182 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 OR8U9P0C7N5 309 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 GADD45AP24522 165 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 HSPA13P48723 471 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 TAGLNQ01995 201 aaKnown RBP10.17□□□□□ -0.78
RTN3-213ENST00000543552 PSG5Q15238 335 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 ASPHD1Q5U4P2 390 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 UNQ5815/PRO19632Q6UWF5 114 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 OR6Q1Q8NGQ2 317 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 DCUN1D4Q92564 292 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 ARPC1AQ92747 370 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 FLYWCH2Q96CP2 140 aaKnown RBP10.17□□□□□ -0.78
RTN3-213ENST00000543552 MGLLQ99685 303 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 PECRQ9BY49 303 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 RAB22AQ9UL26 194 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 FBXO7Q9Y3I1 522 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 NUBP2Q9Y5Y2 271 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 V9GY05 133 aa10.17□□□□□ -0.78
RTN3-213ENST00000543552 STAB2Q8WWQ8 2551 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 H3BUA1 57 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 FABP7O15540 132 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 SOX15O60248 233 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 CA2P00918 260 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 CRHBPP24387 322 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 TMEM50BP56557 158 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 TPPP2P59282 170 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 RPS16P62249 146 aaKnown RBP10.16□□□□□ -0.78
RTN3-213ENST00000543552 PITPNAQ00169 270 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 FABP5Q01469 135 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 C2orf76Q3KRA6 126 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 OR10J5Q8NHC4 309 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 RAB3CQ96E17 227 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 GFI1Q99684 422 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 RDH8Q9NYR8 311 aa10.16□□□□□ -0.78
RTN3-213ENST00000543552 NKX1-2Q9UD57 310 aaPredicted RBP10.16□□□□□ -0.78
RTN3-213ENST00000543552 ANKRD65E5RJM6 399 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 M0R1X1 148 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 FCN1O00602 326 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 CNIH1O95406 144 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 IGKV1-16P04430 117 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 HSPB1P04792 205 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms