RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 FCN1O00602 326 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ATP6V0E1O15342 81 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 EGR2P11161 476 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 GNB3P16520 340 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RAB3BP20337 219 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RAB6AP20340 208 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 VDAC1P21796 283 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 HOXD3P31249 432 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 FGF9P31371 208 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RANBP1P43487 201 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 C22orf42Q6IC83 251 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 LIN54Q6MZP7 749 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ZNF383Q8NA42 475 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MINDY2Q8NBR6 621 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 OR10R2Q8NGX6 335 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 EDARADDQ8WWZ3 215 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RAB3CQ96E17 227 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 YTHDF1Q9BYJ9 559 aaKnown RBP10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 FBXO7Q9Y3I1 522 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RRHO14718 337 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 SOX15O60248 233 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 FCGR3AP08637 254 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CD3GP09693 182 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 GSTT2P0CG29 244 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 GSTT2BP0CG30 244 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MC5RP33032 325 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CRIP2P52943 208 aaPredicted RBP10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 FHL3Q13643 280 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 IGSF11Q5DX21 431 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ZNF491Q8N8L2 437 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 DRAXINQ8NBI3 349 aaPredicted RBP10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 OR4A4PQ8NGN8 299 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 C5orf30Q96GV9 206 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RNF5Q99942 180 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CABLES2Q9BTV7 478 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 FBXL15Q9H469 300 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 TXNL4BQ9NX01 149 aaKnown RBP10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RDH8Q9NYR8 311 aa10.21□□□□□ -0.77
TNFRSF1A-215ENST00000543359 NBEAL2Q6ZNJ1 2754 aa10.21□□□□□ -0.78
TNFRSF1A-215ENST00000543359 STAB2Q8WWQ8 2551 aa10.21□□□□□ -0.78
TNFRSF1A-215ENST00000543359 IGKV1D-8A0A087WSZ0 117 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 TRBV6-7A0A0A0MS04 114 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 I3L521 148 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 FABP7O15540 132 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 HSPA12AO43301 675 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 RBBP9O75884 186 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 DIRAS3O95661 229 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 IGKV1-16P04430 117 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 OR5H8P0DN80 308 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 HIST1H1DP16402 221 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 MYL9P24844 172 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ZNF660Q6AZW8 331 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 Q6ZS49 121 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 OR8U1Q8NH10 309 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 C4orf3Q8WVX3 66 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 MCRIP2Q9BUT9 160 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 GNB4Q9HAV0 340 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 PARP11Q9NR21 331 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ZNF230Q9UIE0 474 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ELF5Q9UKW6 265 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 GAB2Q9UQC2 676 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 WASHC3Q9Y3C0 194 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 NUBP2Q9Y5Y2 271 aa10.2□□□□□ -0.78
TNFRSF1A-215ENST00000543359 KMT2CQ8NEZ4 4911 aaKnown RBP10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 TNCP24821 2201 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 DNAH7Q8WXX0 4024 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 TRAV41A0A0B4J266 112 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SMIM30A4D0T7 59 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 PSMB9P28065 219 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SERPINB10P48595 397 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 RAB9AP51151 201 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 CX3CL1P78423 397 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SSBP2P81877 361 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 RUNX1Q01196 453 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 PSG5Q15238 335 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SRSF7Q16629 238 aaKnown RBP eCLIP10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ASPHD1Q5U4P2 390 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 MAFIPQ8WZ33 124 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 UBE2E2Q96LR5 201 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 GPR61Q9BZJ8 451 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 KIAA1456Q9P272 454 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 STUB1Q9UNE7 303 aa10.19□□□□□ -0.78
TNFRSF1A-215ENST00000543359 A0A075B6Q4 140 aa10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 NOTOA8MTQ0 251 aa10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 H7C2Y5 167 aa10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 TFAP2AP05549 437 aa10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 GSTP1P09211 210 aaKnown RBP10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ZNF773Q6PK81 442 aa10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 FCGR1BQ92637 280 aa10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 OR51E2Q9H255 320 aa10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SDHAF2Q9NX18 166 aa10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SCOCQ9UIL1 159 aa10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ZNF221Q9UK13 617 aa10.18□□□□□ -0.78
TNFRSF1A-215ENST00000543359 METTL21EPA6NDL7 271 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 BET1O15155 118 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 IGLV2-23P01705 113 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 CRYGBP07316 175 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 OR8U9P0C7N5 309 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms