RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 TOR1AO14656 332 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 ITGB1BP1O14713 200 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 MUC1P15941 1255 aaPredicted RBP11.73□□□□□ -0.53
LDB3-207ENST00000542786 ZNF134P52741 427 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 FBXL19-AS1Q494R0 122 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 OR2B11Q5JQS5 317 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 ATRAIDQ6UW56 229 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 SPAG16Q8N0X2 631 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 EDARADDQ8WWZ3 215 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 KCNJ16Q9NPI9 418 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 HSPB7Q9UBY9 170 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 PCNX1Q96RV3 2341 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 WRBO00258 174 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 ATP6V0CP27449 155 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 DUTP33316 252 aaKnown RBP11.72□□□□□ -0.53
LDB3-207ENST00000542786 SULT1A1P50225 295 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 TAS2R30P59541 319 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 ZNF816Q0VGE8 651 aaPredicted RBP11.72□□□□□ -0.53
LDB3-207ENST00000542786 ZNF266Q14584 549 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 NCR3LG1Q68D85 454 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 TCTEX1D2Q8WW35 142 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 CCL13Q99616 98 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 DYSFO75923 2080 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 ICE1Q9Y2F5 2266 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 FAM157AC9JC47 383 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 E7EQL1 145 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 SLC31A2O15432 143 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 FCN3O75636 299 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 C1QL1O75973 258 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 CLDN14O95500 239 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 GYPAP02724 150 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 CD5P06127 495 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 G6PCP35575 357 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 RAB5CP51148 216 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 F2RL1P55085 397 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 EDDM3BP56851 147 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 RPL23AP62750 156 aaKnown RBP11.72□□□□□ -0.53
LDB3-207ENST00000542786 CCL8P80075 99 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 AKR1C1Q04828 323 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 ARL16Q0P5N6 197 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 LTC4SQ16873 150 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 SP5Q6BEB4 398 aaPredicted RBP11.72□□□□□ -0.53
LDB3-207ENST00000542786 ZCCHC24Q8N2G6 241 aaKnown RBP11.72□□□□□ -0.53
LDB3-207ENST00000542786 DEFB108BQ8NET1 73 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 CORO2AQ92828 525 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 ATP5SQ99766 215 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 ZNF665Q9H7R5 613 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 GFOD1Q9NXC2 390 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 GNG12Q9UBI6 72 aa11.72□□□□□ -0.53
LDB3-207ENST00000542786 CARHSP1Q9Y2V2 147 aaKnown RBP11.72□□□□□ -0.53
LDB3-207ENST00000542786 TRGV8A0A0C4DH27 118 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 KBTBD11-OT1A0A1B0GTJ5 212 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 H3BP45 60 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.53
LDB3-207ENST00000542786 FHITP49789 147 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 TNFRSF9Q07011 255 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 TMEM267Q0VDI3 215 aaPredicted RBP11.71□□□□□ -0.53
LDB3-207ENST00000542786 KLRB1Q12918 225 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 C1orf229Q6ZS94 237 aaPredicted RBP11.71□□□□□ -0.53
LDB3-207ENST00000542786 TMEM217Q8N7C4 229 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 ZNF439Q8NDP4 499 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 ST6GALNAC3Q8NDV1 305 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 NEUROG1Q92886 237 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 CLN8Q9UBY8 286 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 GAB2Q9UQC2 676 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 FAM96BQ9Y3D0 163 aa11.71□□□□□ -0.53
LDB3-207ENST00000542786 STRAPQ9Y3F4 350 aaKnown RBP11.71□□□□□ -0.53
LDB3-207ENST00000542786 RAB29O14966 203 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 KRASP01116 189 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 IAPPP10997 89 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 TNFRSF1AP19438 455 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 GPR12P47775 334 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 AARDQ4LEZ3 155 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 DDB2Q92466 427 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 RBKSQ9H477 322 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 LRRC30A6NM36 301 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 C9JQL5 133 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 TRIM77I1YAP6 450 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 ATG12O94817 140 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 APOC3P02656 99 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 TLE1Q04724 770 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 CT45A1Q5HYN5 189 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 ZNF525Q8N782 197 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 CT45A3Q8NHU0 189 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 SUN5Q8TC36 379 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 RNASE6Q93091 150 aaKnown RBP11.7□□□□□ -0.54
LDB3-207ENST00000542786 ZNF251Q9BRH9 671 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 TMEM231Q9H6L2 316 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 NGBQ9NPG2 151 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 C19orf12Q9NSK7 152 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 UQCC1Q9NVA1 299 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 PSENENQ9NZ42 101 aa11.7□□□□□ -0.54
LDB3-207ENST00000542786 TANC2Q9HCD6 1990 aa11.69□□□□□ -0.54
LDB3-207ENST00000542786 TMEM178BH3BS89 294 aa11.69□□□□□ -0.54
LDB3-207ENST00000542786 RBFOX2O43251 390 aaKnown RBP eCLIP11.69□□□□□ -0.54
LDB3-207ENST00000542786 PPIHO43447 177 aaKnown RBP11.69□□□□□ -0.54
LDB3-207ENST00000542786 UBE2KP61086 200 aa11.69□□□□□ -0.54
LDB3-207ENST00000542786 EFNB3Q15768 340 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms