RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 C20orf85Q9H1P6 137 aa15.34■□□□□ 0.05
TNFRSF1A-213ENST00000540022 NUDT15Q9NV35 164 aa15.34■□□□□ 0.05
TNFRSF1A-213ENST00000540022 GAB2Q9UQC2 676 aa15.34■□□□□ 0.05
TNFRSF1A-213ENST00000540022 TRAV6A0A075B6T7 132 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 IGHV1-69DA0A0B4J2H0 117 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 GPR31O00270 319 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ARPC1BO15143 372 aaKnown RBP15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SLC22A5O76082 557 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 IGHV1-69P01742 117 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ZNF137PP52743 207 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 OXA1LQ15070 435 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 PHLDA2Q53GA4 152 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 GPR157Q5UAW9 335 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 RUSC1-AS1Q66K80 236 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 CCBE1Q6UXH8 406 aaPredicted RBP15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 PIP4P2Q8N4L2 257 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 BVESQ8NE79 360 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SCGB3A2Q96PL1 93 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 GHITMQ9H3K2 345 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 AMMECR1Q9Y4X0 333 aaPredicted RBP15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 NUBP2Q9Y5Y2 271 aa15.33■□□□□ 0.05
TNFRSF1A-213ENST00000540022 LY6LH3BQJ8 138 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 NPFFO15130 113 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 RLN1P04808 185 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 HTR1DP28221 377 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 MSMO1Q15800 293 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 PLET1Q6UQ28 207 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 BRD3OSQ6XYD6 125 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 ZNF833PQ6ZTB9 187 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 TMED4Q7Z7H5 227 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 ADAD2Q8NCV1 583 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 AKR1E2Q96JD6 320 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 SLC2A9Q9NRM0 540 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 DPM3Q9P2X0 92 aa15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 C14orf166Q9Y224 244 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-213ENST00000540022 WNK2Q9Y3S1 2297 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 TNFSF12O43508 249 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 FSHBP01225 129 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 IL3RAP26951 378 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 SAA4P35542 130 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 LGALS4P56470 323 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 LINC00205P59089 165 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 EIF4EBP1Q13541 118 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 ABCA11PQ4W5N1 156 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 IL17RELQ6ZVW7 336 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 ZBTB34Q8NCN2 500 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 C17orf50Q8WW18 174 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 TMEM230Q96A57 120 aa15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 ZNF486Q96H40 463 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-213ENST00000540022 A8MV72 311 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 LEUTXA8MZ59 168 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 H2AFB2P0C5Z0 115 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 REG1BP48304 166 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 PIGPP57054 158 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 TRIM16LQ309B1 348 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 MIDNQ504T8 468 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 MINOS1Q5TGZ0 78 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 PRIMA1Q86XR5 153 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 CMTM1Q8IZ96 169 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 CENPSQ8N2Z9 138 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 DRAXINQ8NBI3 349 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 CHPT1Q8WUD6 406 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 AJUBAQ96IF1 538 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 S1PR3Q99500 378 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 TBL2Q9Y4P3 447 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 MINOS1-NBL1R4GNA1 71 aa15.31■□□□□ 0.04
TNFRSF1A-213ENST00000540022 M0R1X1 148 aa15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 CRLF1O75462 422 aa15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 PGLYRP1O75594 196 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 ANXA7P20073 488 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 PAX6P26367 422 aa15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 RAB25P57735 213 aa15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 TPTE2P1Q5T6R2 138 aa15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 DYNAPQ8N1N2 210 aa15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 MARVELD1Q9BSK0 173 aa15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 BEX2Q9BXY8 128 aa15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 BEX1Q9HBH7 125 aa15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 HILPDAQ9Y5L2 63 aa15.3■□□□□ 0.04
TNFRSF1A-213ENST00000540022 AKR1C4P17516 323 aa15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 DUTP33316 252 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 CEACAM3P40198 252 aa15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 RND3P61587 244 aa15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 RPL30P62888 115 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 FAM71F2Q6NXP2 309 aa15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 SLC25A42Q86VD7 318 aa15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 NANPQ8TBE9 248 aa15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 CAPSLQ8WWF8 208 aa15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 RTN4IP1Q8WWV3 396 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 RPEQ96AT9 228 aa15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 MRPL20Q9BYC9 149 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 SOX21Q9Y651 276 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-213ENST00000540022 LINC00473A8K010 186 aa15.28■□□□□ 0.04
TNFRSF1A-213ENST00000540022 INMT-MINDY4F8WBC2 141 aa15.28■□□□□ 0.04
TNFRSF1A-213ENST00000540022 CT45A6P0DMU7 189 aa15.28■□□□□ 0.04
TNFRSF1A-213ENST00000540022 CT45A5P0DMU8 189 aa15.28■□□□□ 0.04
TNFRSF1A-213ENST00000540022 CT45A7P0DMV0 189 aa15.28■□□□□ 0.04
TNFRSF1A-213ENST00000540022 VSIG10L2P0DP72 767 aa15.28■□□□□ 0.04
TNFRSF1A-213ENST00000540022 EPHA1P21709 976 aa15.28■□□□□ 0.04
TNFRSF1A-213ENST00000540022 MECP2P51608 486 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms