RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 BTN1A1Q13410 526 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 EIF4EBP1Q13541 118 aaPredicted RBP16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 OR5C1Q8NGR4 320 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 LRRC46Q96FV0 321 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 DCTN5Q9BTE1 182 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 TREM1Q9NP99 234 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 RNF7Q9UBF6 113 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 K7N7A8 449 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 CD3EP07766 207 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 STX12Q86Y82 276 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 ZCCHC24Q8N2G6 241 aaKnown RBP16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 FGFRL1Q8N441 504 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 LYPD6BQ8NI32 183 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 ITLN2Q8WWU7 325 aaPredicted RBP16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 SH3BGRL3Q9H299 93 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 WSB1Q9Y6I7 421 aa16.84■□□□□ 0.29
PACSIN3-211ENST00000539589 IGHV3-43A0A0B4J1X8 118 aa16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 IGHV3-43DP0DP04 118 aa16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 DYNLT3P51808 116 aa16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 SRSF3P84103 164 aaKnown RBP16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 CR1LQ2VPA4 569 aa16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 ODF3L1Q8IXM7 274 aa16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 TCTEX1D1Q8N7M0 179 aa16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 C5orf30Q96GV9 206 aa16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 GCM1Q9NP62 436 aa16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 STRAPQ9Y3F4 350 aaKnown RBP16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 MMP24Q9Y5R2 645 aa16.83■□□□□ 0.28
PACSIN3-211ENST00000539589 DEFB108AA8MXU0 73 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 SYNGR2O43760 224 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 ATG12O94817 140 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 RPL30P62888 115 aaKnown RBP16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 ZNF66Q6ZN08 573 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 SPAG16Q8N0X2 631 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 TMEM217Q8N7C4 229 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 ZNRF1Q8ND25 227 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 EDARADDQ8WWZ3 215 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 COA4Q9NYJ1 87 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 CACFD1Q9UGQ2 172 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 SIGLEC5O15389 551 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 PRH1P02810 166 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 CAMLGP49069 296 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 TGIF2LYQ8IUE0 185 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 FAM222BQ8WU58 562 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 TCTEX1D2Q8WW35 142 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 UQCC1Q9NVA1 299 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 PSG11Q9UQ72 335 aa16.82■□□□□ 0.28
PACSIN3-211ENST00000539589 MEX3AA1L020 520 aaKnown RBP16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 TXNL1O43396 289 aa16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 RAMP3O60896 148 aa16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 CLDN1O95832 211 aa16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 ARHGDIBP52566 201 aa16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 ZNF561Q8N587 486 aa16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 FAM216AQ8WUB2 273 aa16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 TSNAXQ99598 290 aaKnown RBP16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 HSD17B10Q99714 261 aaKnown RBP16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 TMEM231Q9H6L2 316 aa16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 JPT1Q9UK76 154 aa16.81■□□□□ 0.28
PACSIN3-211ENST00000539589 C17orf100A8MU93 164 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 FAM90A26D6RGX4 464 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 TRIM77I1YAP6 450 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 TOR1AO14656 332 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 CLDN14O95500 239 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 TSPAN15O95858 294 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 PRB1P04280 392 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 MUC1P15941 1255 aaPredicted RBP16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 ATP6V0CP27449 155 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 CD80P33681 288 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 SULT1A1P50225 295 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 EDDM3BP56851 147 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 ZNF616Q08AN1 781 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 BTNL3Q6UXE8 466 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 ZNF295-AS1Q8N0V1 137 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 AGMATQ9BSE5 352 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 NCOR1P1Q9H4R4 102 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 OR6C3Q9NZP0 311 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 GNG12Q9UBI6 72 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 F8W036 122 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 AGPAT2O15120 278 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 ST8SIA5O15466 376 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 LTC4SQ16873 150 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 FAM201AQ5SY85 155 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 ATRAIDQ6UW56 229 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 SVBPQ8N300 66 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 COMMD1Q8N668 190 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 Q8TCH9 128 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 C14orf79Q96F83 325 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 ATP5SQ99766 215 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 C19orf12Q9NSK7 152 aa16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 RAI1Q7Z5J4 1906 aaPredicted RBP16.8■□□□□ 0.28
PACSIN3-211ENST00000539589 RNASEK-C17orf49H0YIS7 233 aa16.79■□□□□ 0.28
PACSIN3-211ENST00000539589 DFFBO76075 338 aa16.79■□□□□ 0.28
PACSIN3-211ENST00000539589 TAS2R30P59541 319 aa16.79■□□□□ 0.28
PACSIN3-211ENST00000539589 ZNF816Q0VGE8 651 aaPredicted RBP16.79■□□□□ 0.28
PACSIN3-211ENST00000539589 OR2B11Q5JQS5 317 aa16.79■□□□□ 0.28
PACSIN3-211ENST00000539589 C10orf91Q5T1B1 145 aa16.79■□□□□ 0.28
PACSIN3-211ENST00000539589 TMEM182Q6ZP80 229 aaPredicted RBP16.79■□□□□ 0.28
PACSIN3-211ENST00000539589 OR2G3Q8NGZ4 309 aa16.79■□□□□ 0.28
PACSIN3-211ENST00000539589 GNPNAT1Q96EK6 184 aaPredicted RBP16.79■□□□□ 0.28
PACSIN3-211ENST00000539589 RAB9BQ9NP90 201 aa16.79■□□□□ 0.28
PACSIN3-211ENST00000539589 PSENENQ9NZ42 101 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms