RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 RAMP1O60894 148 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 TBX6O95947 436 aaPredicted RBP12.49□□□□□ -0.41
CACNB1-206ENST00000539338 CDCP2Q5VXM1 449 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 C5orf17Q8NAS9 161 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 OR2D3Q8NGH3 330 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 CISD1Q9NZ45 108 aaKnown RBP12.49□□□□□ -0.41
CACNB1-206ENST00000539338 NPTNQ9Y639 398 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 ZP1P60852 638 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 PCOLCEQ15113 449 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 FAM216AQ8WUB2 273 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 SPSB2Q99619 263 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 DLL3Q9NYJ7 618 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 UFC1Q9Y3C8 167 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 TMEM229AB2RXF0 380 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 CD74P04233 296 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 Q1RN00 199 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 IZUMO4Q1ZYL8 232 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 SELENOHQ8IZQ5 122 aaKnown RBP12.48□□□□□ -0.41
CACNB1-206ENST00000539338 OR5AU1Q8NGC0 362 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 OR2V2Q96R30 315 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 PITPNC1Q9UKF7 332 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 LOC285556D6RIA3 1793 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 ZNF236Q9UL36 1845 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 SLC35B1P78383 322 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 SHISA5Q8N114 240 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 SGMS2Q8NHU3 365 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 RBKSQ9H477 322 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 PXMP4Q9Y6I8 212 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 RAB29O14966 203 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 IGHMP01871 453 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 ELOBQ15370 118 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 RARRES2Q99969 163 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 FAM222BQ8WU58 562 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 PERPQ96FX8 193 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 WNT5BQ9H1J7 359 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 C1RLQ9NZP8 487 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
CACNB1-206ENST00000539338 IGKV1D-43A0A0B4J1Z2 117 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 J3KRW8 73 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 MGST3O14880 152 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 C19orf35Q6ZS72 473 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 H0YL77 283 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 M0R143 59 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 OR2A4O95047 310 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 LGALS7P47929 136 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 ZNF788Q6ZQV5 615 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 GTF2H5Q6ZYL4 71 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 FGFRL1Q8N441 504 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 FDCSPQ8NFU4 85 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 OR2A7Q96R45 310 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 METRNQ9UJH8 293 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 IGSF23A1L1A6 192 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 NDUFB4O95168 129 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 TRGC2P03986 189 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 ZNF137PP52743 207 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 ZNF362Q5T0B9 420 aaPredicted RBP12.47□□□□□ -0.41
CACNB1-206ENST00000539338 NFAM1Q8NET5 270 aaPredicted RBP12.47□□□□□ -0.41
CACNB1-206ENST00000539338 TMUB1Q9BVT8 246 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 GSX1Q9H4S2 264 aaPredicted RBP12.47□□□□□ -0.41
CACNB1-206ENST00000539338 PPIAL4EA0A075B759 164 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 PPIAL4DF5H284 164 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 PPIAL4FP0DN26 164 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 FHITP49789 147 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 PPIAL4AQ9Y536 164 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 J3QR89 54 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 UNC119Q13432 240 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 ZNF645Q8N7E2 425 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 SMDT1Q9H4I9 107 aa12.47□□□□□ -0.41
CACNB1-206ENST00000539338 IGKV3-7A0A075B6H7 116 aa12.46□□□□□ -0.41
CACNB1-206ENST00000539338 PF4P02776 101 aa12.46□□□□□ -0.41
CACNB1-206ENST00000539338 OR8I2Q8N0Y5 310 aa12.46□□□□□ -0.41
CACNB1-206ENST00000539338 ITLN1Q8WWA0 313 aa12.46□□□□□ -0.41
CACNB1-206ENST00000539338 IL36RNQ9UBH0 155 aa12.46□□□□□ -0.41
CACNB1-206ENST00000539338 A0A0B4J293 547 aa12.46□□□□□ -0.41
CACNB1-206ENST00000539338 K7N7A8 449 aa12.46□□□□□ -0.41
CACNB1-206ENST00000539338 MMDQ15546 238 aa12.46□□□□□ -0.41
CACNB1-206ENST00000539338 C1QL2Q7Z5L3 287 aa12.46□□□□□ -0.41
CACNB1-206ENST00000539338 TMSB15BA0A087X1C1 80 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 IGHV3-72A0A0B4J1Y9 119 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 CYB5R3P00387 301 aaPredicted RBP12.46□□□□□ -0.42
CACNB1-206ENST00000539338 ORM1P02763 201 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 ACAA1P09110 424 aaPredicted RBP12.46□□□□□ -0.42
CACNB1-206ENST00000539338 MPV17P39210 176 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 ZNF818PQ6ZRF7 136 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 GRAMD2BQ96HH9 432 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 PAM16Q9Y3D7 125 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A10PA6NDY2 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A18PA6NE21 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A16PA6NEW6 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A20PA6NIJ5 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A8PA6NJQ4 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A7PA6NKC0 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A22PA8MWA6 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A12PA8MX19 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A5PA8MXJ8 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A23PA8MXZ1 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 C1QTNF9BB2RNN3 333 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 PRSS1P07477 247 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms