RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 M0R1X1 148 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 SERPINE2P07093 398 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 OR5AC1P0C628 307 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 SAA2P0DJI9 122 aaPredicted RBP12.61□□□□□ -0.39
VAMP1-207ENST00000539047 GATA3P23771 443 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 PRTN3P24158 256 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 F2RP25116 425 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 KIR2DS2P43631 304 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 DCAF12L2Q5VW00 463 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 FAM53AQ6NSI3 398 aaPredicted RBP12.61□□□□□ -0.39
VAMP1-207ENST00000539047 VMO1Q7Z5L0 202 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 AKAP14Q86UN6 197 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 LGI3Q8N145 548 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 LINC01356Q8N9X3 169 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 BEND2Q8NDZ0 799 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 MITD1Q8WV92 249 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 TMEM186Q96B77 213 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 FOXC2Q99958 501 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 AGMATQ9BSE5 352 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 REG4Q9BYZ8 158 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 SIRT7Q9NRC8 400 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 SDHAF2Q9NX18 166 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 SHPKQ9UHJ6 478 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 CELSR1Q9NYQ6 3014 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 RNF223E7ERA6 249 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 SLC31A2O15432 143 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 ATG12O94817 140 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 IFNA21P01568 189 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 CEACAM3P40198 252 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 THBS3P49746 956 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 LDLRAD3Q86YD5 345 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 PNKDQ8N490 385 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 CD300LFQ8TDQ1 290 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 PCGF1Q9BSM1 259 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 UNKLQ9H9P5 680 aaKnown RBP12.6□□□□□ -0.39
VAMP1-207ENST00000539047 MGAT4CQ9UBM8 478 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 INSIG2Q9Y5U4 225 aa12.6□□□□□ -0.39
VAMP1-207ENST00000539047 TXNL1O43396 289 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 ARG1P05089 322 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 GZMKP49863 264 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 ZNF134P52741 427 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 LGALS4P56470 323 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 SUPT4H1P63272 117 aaKnown RBP12.59□□□□□ -0.39
VAMP1-207ENST00000539047 PAX2Q02962 417 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 HLA-DRB5Q30154 266 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 LIAT1Q6ZQX7 453 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 ZNF695Q8IW36 515 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 C11orf42Q8N5U0 333 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 Q8N7P7 452 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 RNASE11Q8TAA1 199 aaKnown RBP12.59□□□□□ -0.39
VAMP1-207ENST00000539047 CHAC2Q8WUX2 184 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 TMEM222Q9H0R3 208 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 SIRPDQ9H106 197 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 FAM212BQ9NTI7 297 aaPredicted RBP12.59□□□□□ -0.39
VAMP1-207ENST00000539047 AKAP9Q99996 3911 aa12.59□□□□□ -0.39
VAMP1-207ENST00000539047 DUXBA0A1W2PPF3 345 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 GOSR2O14653 212 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 IGLV2-14P01704 120 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 APOA2P02652 100 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 RPA2P15927 270 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 TAGLNQ01995 201 aaKnown RBP12.58□□□□□ -0.4
VAMP1-207ENST00000539047 RTL8BQ17RB0 113 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 RPL39P5Q59GN2 51 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 OR11H6Q8NGC7 330 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 TP53RKQ96S44 253 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 PDCD10Q9BUL8 212 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 MMP26Q9NRE1 261 aa12.58□□□□□ -0.4
VAMP1-207ENST00000539047 CCNKO75909 580 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 SULT1A3P0DMM9 295 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 SULT1A4P0DMN0 295 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 RRASP10301 218 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 EPHA1P21709 976 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 UCP1P25874 307 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 HTR1DP28221 377 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 ARHGDIBP52566 201 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 TMEM187Q14656 261 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 FCN2Q15485 313 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 SP6Q3SY56 376 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 TMEM268Q5VZI3 342 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 GSG1LQ6UXU4 331 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 ZNF833PQ6ZTB9 187 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 TGIF2LXQ8IUE1 241 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 ASB13Q8WXK3 278 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 IL22RA2Q969J5 263 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 RPEQ96AT9 228 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 C1orf159Q96HA4 380 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 RAB18Q9NP72 206 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 CCDC168Q8NDH2 2452 aa12.57□□□□□ -0.4
VAMP1-207ENST00000539047 C5orf51A6NDU8 294 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 FAM25EA8MYX2 175 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 LEUTXA8MZ59 168 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 J3QLI3 93 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 GAPDHP04406 335 aaKnown RBP12.56□□□□□ -0.4
VAMP1-207ENST00000539047 HOXB4P17483 251 aaPredicted RBP12.56□□□□□ -0.4
VAMP1-207ENST00000539047 DUTP33316 252 aaKnown RBP12.56□□□□□ -0.4
VAMP1-207ENST00000539047 ZNF137PP52743 207 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 ANKRD55Q3KP44 614 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 OR2B11Q5JQS5 317 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 LCE2DQ5TA82 110 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms