RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 TRIM61Q5EBN2 209 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 TMEM14EPQ6UXP3 125 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 CPEB2Q7Z5Q1 589 aaKnown RBP5.68□□□□□ -1.5
USP28-207ENST00000538475 CALHM1Q8IU99 346 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 MUC15Q8N387 334 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 RPP25LQ8N5L8 163 aaKnown RBP5.68□□□□□ -1.5
USP28-207ENST00000538475 ZNF441Q8N8Z8 693 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 Q8N976 141 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 OR10G8Q8NGN5 311 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 OR10G6Q8NH81 332 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 SGMS2Q8NHU3 365 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 RNF138Q8WVD3 245 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 OR1E3Q8WZA6 343 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 TNFRSF14Q92956 283 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 GPR146Q96CH1 333 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 SFRP2Q96HF1 295 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 VPS25Q9BRG1 176 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 LRFN3Q9BTN0 628 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 ELOVL1Q9BW60 279 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 PATZ1Q9HBE1 687 aaKnown RBP5.68□□□□□ -1.5
USP28-207ENST00000538475 PSENENQ9NZ42 101 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 COPS7AQ9UBW8 275 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 PIGLQ9Y2B2 252 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 GTF3C1Q12789 2109 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 C2orf16Q68DN1 1984 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 TRAV9-2A0A087WT02 112 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 IGKV1D-43A0A0B4J1Z2 117 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 A0A1W2PRS3 328 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 DPRXA6NFQ7 191 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 TMEM238C9JI98 176 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 C11orf94C9JXX5 98 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 SERF1AO75920 110 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 VAMP5O95183 116 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 NAPSAO96009 420 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 TNFP01375 233 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 HLA-DRB1P01911 266 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 SERPINE2P07093 398 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 HLA-DOBP13765 273 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 CTGFP29279 349 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 OPRM1P35372 400 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 WNT5AP41221 380 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 RBM11P57052 281 aaKnown RBP5.67□□□□□ -1.5
USP28-207ENST00000538475 CARD18P57730 90 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 DLX2Q07687 328 aaPredicted RBP5.67□□□□□ -1.5
USP28-207ENST00000538475 SLC38A11Q08AI6 406 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 RAB30Q15771 203 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 NNATQ16517 81 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 BATFQ16520 125 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 HLA-DRB5Q30154 266 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 TSPO2Q5TGU0 170 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 RAET1LQ5VY80 246 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 FAM71F2Q6NXP2 309 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 C12orf54Q6X4T0 127 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 RNF144BQ7Z419 303 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.67□□□□□ -1.5
USP28-207ENST00000538475 LINC00482Q8N8I6 264 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 ZNF709Q8N972 641 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 ZIC4Q8N9L1 334 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 SUMF1Q8NBK3 374 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 NECAP1Q8NC96 275 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 ZBTB34Q8NCN2 500 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 OR11L1Q8NGX0 322 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 PSMF1Q92530 271 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 ZNF524Q96C55 264 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 BORCS8Q96FH0 119 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 NUDT11Q96G61 164 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 KCNS1Q96KK3 526 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 LYZL4Q96KX0 146 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 OR4C12Q96R67 309 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 RSG1Q9BU20 258 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 SFXN3Q9BWM7 321 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 CST9LQ9H4G1 147 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 NRN1Q9NPD7 142 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 SLC7A10Q9NS82 523 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 LANCL2Q9NS86 450 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 HCFC1R1Q9NWW0 138 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 HS3ST3A1Q9Y663 406 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 ATP23Q9Y6H3 246 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 ARHGAP21Q5T5U3 1957 aa5.67□□□□□ -1.5
USP28-207ENST00000538475 SLC22A20A6NK97 555 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 PRRG2O14669 202 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 CDIPTO14735 213 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 NUPR1O60356 82 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 PGLYRP1O75594 196 aaPredicted RBP5.66□□□□□ -1.5
USP28-207ENST00000538475 EML2O95834 649 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 HLA-DQA1P01909 254 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 SRD5A2P31213 254 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 CEACAM8P31997 349 aaPredicted RBP5.66□□□□□ -1.5
USP28-207ENST00000538475 TIMP3P35625 211 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 TNFRSF4P43489 277 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 TFPI2P48307 235 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 RRADP55042 308 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 FGF8P55075 233 aaPredicted RBP5.66□□□□□ -1.5
USP28-207ENST00000538475 LGALS4P56470 323 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 TMEM267Q0VDI3 215 aaPredicted RBP5.66□□□□□ -1.5
USP28-207ENST00000538475 MFAP5Q13361 173 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 STUMQ69YW2 141 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 PRR27Q6MZM9 219 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 RHBDD2Q6NTF9 364 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 MRPL54Q6P161 138 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms