RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SCGNO76038 276 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 CST7O76096 145 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 RLN2P04090 185 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 CSF1P09603 554 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 OR5AC1P0C628 307 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 EFNB3Q15768 340 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 VMA21Q3ZAQ7 101 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 C19orf35Q6ZS72 473 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 SLC25A38Q96DW6 304 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 SCGB3A2Q96PL1 93 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 PRRT1Q99946 306 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 SLC25A22Q9H936 323 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 SMLR1H3BR10 107 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 IGHV1-8P0DP01 117 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 FGF9P31371 208 aaPredicted RBP5.94□□□□□ -1.46
MSH6-209ENST00000538136 OR5AP2Q8NGF4 316 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 DYNC2LI1Q8TCX1 351 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 MRAPQ8TCY5 172 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 TMEM230Q96A57 120 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 PTTG2Q9NZH5 202 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 OTOGQ6ZRI0 2925 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 TRBV5-7A0A0A0MS05 114 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 A0A0A6YYD4 124 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 RAB29O14966 203 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 CHST1O43916 411 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 CNTFRP26992 372 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 HIST1H3AP68431 136 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 HIST2H3PS2Q5TEC6 136 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 HIST2H3AQ71DI3 136 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 SLC35E3Q7Z769 313 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 C11orf53Q8IXP5 236 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 GBGT1Q8N5D6 347 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 ETV7Q9Y603 341 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 HMGB3O15347 200 aaKnown RBP5.93□□□□□ -1.46
MSH6-209ENST00000538136 OPRK1P41145 380 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 NKX2-5P52952 324 aaPredicted RBP5.93□□□□□ -1.46
MSH6-209ENST00000538136 DEFB136Q30KP8 78 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 DTX2Q86UW9 622 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 ZNF75AQ96N20 296 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 CACNG5Q9UF02 275 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 AMMECR1Q9Y4X0 333 aaPredicted RBP5.93□□□□□ -1.46
MSH6-209ENST00000538136 G3V318 75 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 OR2J3O76001 311 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 TUBG1P23258 451 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 LGALS7P47929 136 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 UNQ9370/PRO34162Q6UXP9 181 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 TBC1D26Q86UD7 250 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 OR4C13Q8NGP0 309 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 BORCS5Q969J3 196 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 TUBG2Q9NRH3 451 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 IGKV1D-13A0A0B4J2D9 117 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 ZFP92A6NM28 416 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 TCF21O43680 179 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 SSSCA1O60232 199 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 IGKV3-20P01619 116 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 OR5G3P0C626 314 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 IGKV1-13P0DP09 117 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 VDAC1P21796 283 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 TPPP2P59282 170 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 FXYD3Q14802 87 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 CCDC144NLQ6NUI1 221 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 CELF2-AS1Q8N7Q2 184 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 TERB2Q8NHR7 220 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 COQ8AQ8NI60 647 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 C15orf40Q8WUR7 153 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 GIMAP1Q8WWP7 306 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 SPSB4Q96A44 273 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 C10orf35Q96D05 121 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 GFI1Q99684 422 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 HSD17B10Q99714 261 aaKnown RBP5.93□□□□□ -1.46
MSH6-209ENST00000538136 PITPNC1Q9UKF7 332 aa5.93□□□□□ -1.46
MSH6-209ENST00000538136 SAA2-SAA4A0A096LPE2 208 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 KIAA1324LA8MWY0 1029 aaPredicted RBP5.92□□□□□ -1.46
MSH6-209ENST00000538136 TEX46H3BTG2 121 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 J3QW42 95 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 CCNKO75909 580 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 SAA2P0DJI9 122 aaPredicted RBP5.92□□□□□ -1.46
MSH6-209ENST00000538136 LMO4P61968 165 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 SIGIRRQ6IA17 410 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 ACSM6Q6P461 480 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 FOXL2NBQ6ZUU3 175 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 OR10A7Q8NGE5 316 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 OR13C8Q8NGS7 320 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 C8orf46Q8TAG6 207 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 ZFAND1Q8TCF1 268 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 PCNPQ8WW12 178 aaKnown RBP5.92□□□□□ -1.46
MSH6-209ENST00000538136 MIXL1Q9H2W2 232 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 C1RLQ9NZP8 487 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 TRAV20A0A0B4J274 112 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 MSGN1A6NI15 193 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 GABARAPH6UMI1 98 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 J3QR06 171 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 HLA-DQB1P01920 261 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 MELTFP08582 738 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 SCGB2A2Q13296 93 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 ADAD2Q8NCV1 583 aaKnown RBP5.92□□□□□ -1.46
MSH6-209ENST00000538136 SSMEM1Q8WWF3 244 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 SLIRPQ9GZT3 109 aaKnown RBP5.92□□□□□ -1.46
MSH6-209ENST00000538136 OR2W1Q9Y3N9 320 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 J3QRE1 110 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms