RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 MUC15Q8N387 334 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 ZNF525Q8N782 197 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 FLVCR1-AS1Q8TAF5 88 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 GMPPAQ96IJ6 420 aaPredicted RBP9.09□□□□□ -0.95
RTN3-208ENST00000537981 LYZL4Q96KX0 146 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 SLC39A9Q9NUM3 307 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 ZNF586Q9NXT0 402 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 MRPS16Q9Y3D3 137 aaKnown RBP9.09□□□□□ -0.95
RTN3-208ENST00000537981 UBE2L5PA0A1B0GUS4 154 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 K7ERU9 68 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 PLPP3O14495 311 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 NPIPB7O75200 414 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 OTX2P32243 289 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 P2RY2P41231 377 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 NPBWR2P48146 333 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 SGCBQ16585 318 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 PIGYQ3MUY2 71 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 SPIN3Q5JUX0 258 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 ZNF818PQ6ZRF7 136 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 CPT1CQ8TCG5 803 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 ZNF576Q9H609 170 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 CLEC1BQ9P126 229 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 POLR1DQ9Y2S0 133 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 ZNF253O75346 499 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 RHBDL1O75783 438 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 IGHG1P01857 330 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 ECI1P42126 302 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 RPS18P62269 152 aaKnown RBP9.08□□□□□ -0.96
RTN3-208ENST00000537981 SLAQ13239 276 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 NSDHLQ15738 373 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 ASPHD1Q5U4P2 390 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 RAET1LQ5VY80 246 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 VWA1Q6PCB0 445 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 KIR3DL3Q8N743 410 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 CCL4L1Q8NHW4 92 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 BAHD1Q8TBE0 780 aaPredicted RBP9.08□□□□□ -0.96
RTN3-208ENST00000537981 ASB10Q8WXI3 467 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 NAA38Q9BRA0 125 aaKnown RBP9.08□□□□□ -0.96
RTN3-208ENST00000537981 CLEC7AQ9BXN2 247 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 HDAC8Q9BY41 377 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 PRO3102Q9H379 93 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 COL4A6Q14031 1691 aa9.08□□□□□ -0.96
RTN3-208ENST00000537981 CABIN1Q9Y6J0 2220 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 IGKV1D-13A0A0B4J2D9 117 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 FCN1O00602 326 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 NDUFB4O95168 129 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 SLC35E2P0CK97 266 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 IGKV1-13P0DP09 117 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 NTF3P20783 257 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 PPOXP50336 477 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 PSG7Q13046 419 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 EIF3IQ13347 325 aaKnown RBP9.07□□□□□ -0.96
RTN3-208ENST00000537981 SCGB1C1Q8TD33 95 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 ZNF479Q96JC4 524 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 OR4C12Q96R67 309 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 CHODLQ9H9P2 273 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 WASHC3Q9Y3C0 194 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 TRANK1O15050 2925 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 LTBP2Q14767 1821 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 TRAV36DV7A0A075B6V5 113 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 ZNF716A6NP11 495 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 TMEM250H0YL14 139 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 EFEMP2O95967 443 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 CA2P00918 260 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 PSMB3P49720 205 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 ZNF841Q6ZN19 808 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 Q96M66 194 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 CRIM1Q9NZV1 1036 aa9.07□□□□□ -0.96
RTN3-208ENST00000537981 HEATR1Q9H583 2144 aaKnown RBP9.07□□□□□ -0.96
RTN3-208ENST00000537981 SNURFLB1AK76 121 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 MS4A18H0YCH9 400 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 SIRPB1O00241 398 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 ZNF207O43670 478 aaKnown RBP9.06□□□□□ -0.96
RTN3-208ENST00000537981 UTS2O95399 124 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 NUDT3O95989 172 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 IFNA1P01562 189 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 CXCL10P02778 98 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 CD99P14209 185 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 MS4A18Q3C1V0 323 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 Q56UQ5 140 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 LRRC10Q5BKY1 277 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 UBALD2Q8IYN6 164 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 GAPTQ8N292 157 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 STPG3Q8N7X2 389 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 TMEM186Q96B77 213 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 DDIT4LQ96D03 193 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 SFRP2Q96HF1 295 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 SLC7A10Q9NS82 523 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 MRPL27Q9P0M9 148 aaKnown RBP9.06□□□□□ -0.96
RTN3-208ENST00000537981 PILRBQ9UKJ0 227 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 PPIAL4EA0A075B759 164 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 PPIAL4CA0A0B4J2A2 164 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 C11orf94C9JXX5 98 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 PPIAL4DF5H284 164 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 PPYP01298 95 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 CLPSP04118 112 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 PPIAL4FP0DN26 164 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 OTX1P32242 354 aaPredicted RBP9.06□□□□□ -0.96
RTN3-208ENST00000537981 FOXL1Q12952 345 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 IGFBP7Q16270 282 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms