RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 OR13D1Q8NGV5 346 aa12.72□□□□□ -0.37
SFSWAP-206ENST00000537582 OR10X1Q8NGY0 326 aa12.72□□□□□ -0.37
SFSWAP-206ENST00000537582 ZFAND1Q8TCF1 268 aa12.72□□□□□ -0.37
SFSWAP-206ENST00000537582 C17orf50Q8WW18 174 aa12.72□□□□□ -0.37
SFSWAP-206ENST00000537582 C14orf166Q9Y224 244 aaKnown RBP12.72□□□□□ -0.37
SFSWAP-206ENST00000537582 ALG5Q9Y673 324 aa12.72□□□□□ -0.37
SFSWAP-206ENST00000537582 AUP1Q9Y679 476 aa12.72□□□□□ -0.37
SFSWAP-206ENST00000537582 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.71□□□□□ -0.373e-6■■■□□ 18.7
SFSWAP-206ENST00000537582 ODF3BA8MYP8 253 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 TOR1AO14656 332 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 PGLYRP1O75594 196 aaPredicted RBP12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 ECI1P42126 302 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 RAB7AP51149 207 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 RPL30P62888 115 aaKnown RBP12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 SUPT4H1P63272 117 aaKnown RBP12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 PPP1R1AQ13522 171 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 EIF4EBP1Q13541 118 aaPredicted RBP12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 HLA-DRB5Q30154 266 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 ABCA11PQ4W5N1 156 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 RUSC1-AS1Q66K80 236 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 CYB5R2Q6BCY4 276 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 LHFPL4Q7Z7J7 247 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 TBC1D26Q86UD7 250 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 SLC25A42Q86VD7 318 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 TCTE3Q8IZS6 198 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 LINC00311Q8N616 119 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 C8orf31Q8N9H6 132 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 BVESQ8NE79 360 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 OR11H6Q8NGC7 330 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 HEXA-AS1Q9H8Q6 139 aa12.71□□□□□ -0.37
SFSWAP-206ENST00000537582 CENPVL3A0A0U1RRI6 287 aa12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 M0R1X1 148 aa12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 OR4E1P0C645 316 aa12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 IGHV4-38-2P0DP08 117 aa12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 MECP2P51608 486 aaKnown RBP12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 UBE2MP61081 183 aaKnown RBP12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 SP6Q3SY56 376 aa12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 ZNF626Q68DY1 528 aa12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 OR51H1Q8NH63 302 aa12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 RTN4IP1Q8WWV3 396 aaPredicted RBP12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 ST6GALNAC6Q969X2 333 aa12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 SCGB3A2Q96PL1 93 aa12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 SOX21Q9Y651 276 aaPredicted RBP12.7□□□□□ -0.38
SFSWAP-206ENST00000537582 TEX15Q9BXT5 2789 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 TRAV40A0A0B4J280 105 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 LINC00473A8K010 186 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 BUB1B-PAK6H3BSN5 160 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 RAB29O14966 203 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 VAMP1P23763 118 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 NKX2-5P52952 324 aaPredicted RBP12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 PRRX1P54821 245 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 SLC9A3R2Q15599 337 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 C4orf46Q504U0 113 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 OR2B11Q5JQS5 317 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 KLF17Q5JT82 389 aaPredicted RBP12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 NCR3LG1Q68D85 454 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 LPCAT3Q6P1A2 487 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 GLDNQ6ZMI3 551 aaPredicted RBP12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 BEND2Q8NDZ0 799 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 A0A0A6YYJ9 748 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 CRYM-AS1A6NIL9 109 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 A8MV72 311 aaPredicted RBP12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 LY6LH3BQJ8 138 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 MPPED1O15442 326 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 IFITM2Q01629 132 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 BRD3OSQ6XYD6 125 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 ZNF833PQ6ZTB9 187 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 DYNAPQ8N1N2 210 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 AKR1E2Q96JD6 320 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 TP53RKQ96S44 253 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 SMR3AQ99954 134 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 MRPL20Q9BYC9 149 aaKnown RBP12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 NAA60Q9H7X0 242 aa12.69□□□□□ -0.38
SFSWAP-206ENST00000537582 TEX13DA0A0J9YY54 714 aaPredicted RBP12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 C7orf66A4D0T2 115 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 GATA3P23771 443 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 UBE2E1P51965 193 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 RAG2P55895 527 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 BRWD1-AS2P59051 145 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 RND3P61587 244 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 RRAS2P62070 204 aaPredicted RBP12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 DHODHQ02127 395 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 DHRS2Q13268 280 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 NOXA1Q86UR1 476 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 CMTM1Q8IZ96 169 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 CASTOR1Q8WTX7 329 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 AJUBAQ96IF1 538 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 PIPOXQ9P0Z9 390 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 ACANP16112 2415 aa12.68□□□□□ -0.38
SFSWAP-206ENST00000537582 ABCA1O95477 2261 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 C9orf170A2RU37 121 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 HLA-AP01891 365 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 OR5AC1P0C628 307 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 CT45A6P0DMU7 189 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 CT45A5P0DMU8 189 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 CT45A7P0DMV0 189 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 DUTP33316 252 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 SAA4P35542 130 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 ZNF137PP52743 207 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms