RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 DUX4L2P0CJ85 424 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 DUX4L3P0CJ86 424 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 DUX4L4P0CJ87 422 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 DUX4L5P0CJ88 424 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 DUX4L6P0CJ89 424 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 DUX4L7P0CJ90 424 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 RRASP10301 218 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 PGAM2P15259 253 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 SPNP16150 400 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 F2RP25116 425 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 UCP1P25874 307 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 CEACAM3P40198 252 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 LGALS4P56470 323 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 PIGPP57054 158 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 RRAS2P62070 204 aaPredicted RBP5.32□□□□□ -1.56
CDCA3-205ENST00000535871 CYCSP99999 105 aaKnown RBP5.32□□□□□ -1.56
CDCA3-205ENST00000535871 HOXA4Q00056 320 aaPredicted RBP5.32□□□□□ -1.56
CDCA3-205ENST00000535871 PAX8Q06710 450 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 SRSF4Q08170 494 aaKnown RBP5.32□□□□□ -1.56
CDCA3-205ENST00000535871 EIF4EBP1Q13541 118 aaPredicted RBP5.32□□□□□ -1.56
CDCA3-205ENST00000535871 ZNF273Q14593 569 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 AVPI1Q5T686 147 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 MINOS1Q5TGZ0 78 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 DUX4L9Q6RFH8 374 aaPredicted RBP5.32□□□□□ -1.56
CDCA3-205ENST00000535871 FAM219AQ8IW50 185 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 PRR18Q8N4B5 295 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 TPRX1Q8N7U7 411 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 PERPQ96FX8 193 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 TMEM56Q96MV1 263 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 S1PR3Q99500 378 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 RNF5Q99942 180 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 CLEC7AQ9BXN2 247 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 FXYD6Q9H0Q3 95 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 TMEM222Q9H0R3 208 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 MMP28Q9H239 520 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 IFI27L2Q9H2X8 130 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 OR51J1Q9H342 316 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 NAA60Q9H7X0 242 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 LPAR2Q9HBW0 351 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 RAB18Q9NP72 206 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 DUX4Q9UBX2 424 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 PRELID3BQ9Y3B1 194 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 TBL2Q9Y4P3 447 aaKnown RBP5.32□□□□□ -1.56
CDCA3-205ENST00000535871 RBM7Q9Y580 266 aaKnown RBP5.32□□□□□ -1.56
CDCA3-205ENST00000535871 MINOS1-NBL1R4GNA1 71 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 TMEM56-RWDD3S4R434 201 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 NOTCH2Q04721 2471 aa5.32□□□□□ -1.56
CDCA3-205ENST00000535871 TRAV6A0A075B6T7 132 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 IGHV4-30-2A0A087WSY4 118 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 A0A0A6YYJ9 748 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 IGHV2-26A0A0B4J1V2 119 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 A0A0B4J293 547 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 IGKV1D-13A0A0B4J2D9 117 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 TEX13DA0A0J9YY54 714 aaPredicted RBP5.31□□□□□ -1.56
CDCA3-205ENST00000535871 C3orf85A0A1B0GTC6 90 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 FAM90A9PA6NNJ1 464 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 PGLYRP1O75594 196 aaPredicted RBP5.31□□□□□ -1.56
CDCA3-205ENST00000535871 OR2A4O95047 310 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 LY86O95711 162 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 HLA-AP01891 365 aaKnown RBP5.31□□□□□ -1.56
CDCA3-205ENST00000535871 MSMBP08118 114 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 OR8U9P0C7N5 309 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 SULT1A3P0DMM9 295 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 SULT1A4P0DMN0 295 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 IGKV1-13P0DP09 117 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 COL8A1P27658 744 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 MC5RP33032 325 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 PPP1CCP36873 323 aaKnown RBP5.31□□□□□ -1.56
CDCA3-205ENST00000535871 RBMXP38159 391 aaKnown RBP5.31□□□□□ -1.56
CDCA3-205ENST00000535871 GPR12P47775 334 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 THBS3P49746 956 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 GZMKP49863 264 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 RAB13P51153 203 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 UBE2E1P51965 193 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 DVL1P1P54792 670 aaPredicted RBP5.31□□□□□ -1.56
CDCA3-205ENST00000535871 FXYD4P59646 89 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 SUPT4H1P63272 117 aaKnown RBP5.31□□□□□ -1.56
CDCA3-205ENST00000535871 CARTPTQ16568 116 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 MIDNQ504T8 468 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 CT45A1Q5HYN5 189 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 LIN54Q6MZP7 749 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 CCDC144NLQ6NUI1 221 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 ZNF818PQ6ZRF7 136 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 ZNF833PQ6ZTB9 187 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 TMED4Q7Z7H5 227 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 LGI3Q8N145 548 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 ABHD12Q8N2K0 398 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 C12orf45Q8N5I9 185 aaPredicted RBP5.31□□□□□ -1.56
CDCA3-205ENST00000535871 DRAM1Q8N682 238 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 OR52L2PQ8NGH6 319 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 OR8U1Q8NH10 309 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 CT45A3Q8NHU0 189 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 RFESDQ8TAC1 157 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 SECTM1Q8WVN6 248 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 LSM10Q969L4 123 aaKnown RBP5.31□□□□□ -1.56
CDCA3-205ENST00000535871 ST6GALNAC6Q969X2 333 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 TMEM230Q96A57 120 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 ABHD14BQ96IU4 210 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 OR2A7Q96R45 310 aa5.31□□□□□ -1.56
CDCA3-205ENST00000535871 SIRPDQ9H106 197 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms