RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 UBE2UQ5VVX9 321 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 PLCXD3Q63HM9 321 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 C8orf82Q6P1X6 216 aaPredicted RBP2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 GLDNQ6ZMI3 551 aaPredicted RBP2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 LINC00336Q6ZUF6 198 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF367Q7RTV3 350 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 CYP4Z1Q86W10 505 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 Q8N6K4 173 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 AQP11Q8NBQ7 271 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 CSNK2A3Q8NEV1 391 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 PROKR2Q8NFJ6 384 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 OR9Q2Q8NGE9 314 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 OR8B12Q8NGG6 310 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 OR5A2Q8NGI9 324 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 UBALD1Q8TB05 177 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF596Q8TC21 504 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 RGP1Q92546 391 aaPredicted RBP2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 FCGR1BQ92637 280 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 SNAPC3Q92966 411 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 TOMM40LQ969M1 308 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 SLAMF9Q96A28 289 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 RPEQ96AT9 228 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 LGALS12Q96DT0 336 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 YIPF6Q96EC8 236 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF486Q96H40 463 aaPredicted RBP2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 PRRC1Q96M27 445 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 RDH12Q96NR8 316 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 IL4I1Q96RQ9 567 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 S1PR3Q99500 378 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 RASL11BQ9BPW5 248 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 NEURL2Q9BR09 285 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 MROQ9BYG7 248 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 MAGIXQ9H6Y5 334 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 NIPAL2Q9H841 368 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 MED20Q9H944 212 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 HES4Q9HCC6 221 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 ACOT13Q9NPJ3 140 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 DCAF13Q9NV06 445 aaKnown RBP2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 APLNQ9ULZ1 77 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 SLC7A11Q9UPY5 501 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 PSG11Q9UQ72 335 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 PEX16Q9Y5Y5 336 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 LINC00312Q9Y6C7 94 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 A3GALT2U3KPV4 340 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 FAT3Q8TDW7 4589 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 IGKV1-27A0A075B6S5 117 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 TRAV41A0A0B4J266 112 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 FAM230AA0A1W2PPH8 454 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 PQLC2LA1A4F0 135 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 MSGN1A6NI15 193 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 METTL15A6NJ78 407 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 CENPXA8MT69 81 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 OR11H12B2RN74 326 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 IGLL5B9A064 214 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 SMLR1H3BR10 107 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 J3QR06 171 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 FCN1O00602 326 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 DEFB4AO15263 64 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 ATP6V0E1O15342 81 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 MAGEB4O15481 346 aaPredicted RBP2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 NOS1APO75052 506 aaPredicted RBP2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 CDRT1O95170 752 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 GADD45GO95257 159 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 PTTG1O95997 202 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 HAND1O96004 215 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 NRASP01111 189 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 NPPAP01160 153 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 TRBV12-3P01733 135 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 RBP4P02753 201 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 HSPB1P04792 205 aaKnown RBP2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 CDK1P06493 297 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 LGALS1P09382 135 aaKnown RBP2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 INAFM2P0DMQ5 153 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 CGB3P0DN86 165 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 CGB7P0DN87 165 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 IL7P13232 177 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 CTRB1P17538 263 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 MYL12AP19105 171 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 HSD11B1P28845 292 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 CD34P28906 385 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 BLVRBP30043 206 aaPredicted RBP2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 KDELR2P33947 212 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 ATP6V1E1P36543 226 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 CEACAM3P40198 252 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 NPBWR2P48146 333 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 PPP5CP53041 499 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 SYNJ2BPP57105 145 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 SELENOWP63302 87 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 IFITM3Q01628 133 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 MEF2CQ06413 473 aaPredicted RBP2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 MFGE8Q08431 387 aaPredicted RBP2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 ST3GAL4Q11206 333 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 KLF5Q13887 457 aaPredicted RBP2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 IL18Q14116 193 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 EBI3Q14213 229 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 OXA1LQ15070 435 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 CTF1Q16619 201 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 TIMM50Q3ZCQ8 353 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 LCN1P1Q5VSP4 162 aa2.19□□□□□ -2.06
CHMP4A-208ENST00000534106 CTRB2Q6GPI1 263 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms