RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 OR5A2Q8NGI9 324 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 OR5P3Q8WZ94 311 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 CYB5R3P00387 301 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-226ENST00000533820 CD55P08174 381 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 DEFA4P12838 97 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 H1FOOQ8IZA3 346 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-226ENST00000533820 OR2M7Q8NG81 312 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 POM121L2Q96KW2 1035 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 OR4C12Q96R67 309 aa16.37■□□□□ 0.21
CAPN1-226ENST00000533820 IGHEP01854 428 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 TFF1P04155 84 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 SOX8P57073 446 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 ADIRFQ15847 76 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 SPINK9Q5DT21 86 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 SLC35E3Q7Z769 313 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 A0A087WWC5 75 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 A0A1B0GU03 582 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 CLDN18P56856 261 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 PLGLB1Q02325 96 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-226ENST00000533820 ZNF808Q8N4W9 903 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-226ENST00000533820 ZNF525Q8N782 197 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 OR8G5Q8NG78 346 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 OR1L6Q8NGR2 347 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 RPUSD4Q96CM3 377 aaKnown RBP16.36■□□□□ 0.21
CAPN1-226ENST00000533820 RAB40CQ96S21 281 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 RBKSQ9H477 322 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 LOXL2Q9Y4K0 774 aa16.36■□□□□ 0.21
CAPN1-226ENST00000533820 CLDN1O95832 211 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 SERPINA7P05543 415 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 CEACAM1P13688 526 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 BRS3P32247 399 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 RP1L1Q8IWN7 2480 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-226ENST00000533820 MCEMP1Q8IX19 187 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 MRPL41Q8IXM3 137 aaKnown RBP16.35■□□□□ 0.21
CAPN1-226ENST00000533820 OR5T1Q8NG75 326 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 NCOR1P1Q9H4R4 102 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 DUXBA0A1W2PPF3 345 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 NEURL1O76050 574 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 MT-CO3P00414 261 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 KRASP01116 189 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 IGLV2-14P01704 120 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 BMP5P22003 454 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 TNFSF10P50591 281 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 GNG3P63215 75 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 C1orf185Q5T7R7 199 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 SP5Q6BEB4 398 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-226ENST00000533820 C6orf15Q6UXA7 325 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-226ENST00000533820 ABHD14BQ96IU4 210 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 CABLES2Q9BTV7 478 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 PITPNC1Q9UKF7 332 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 ICE1Q9Y2F5 2266 aa16.35■□□□□ 0.21
CAPN1-226ENST00000533820 CDKN1BP46527 198 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 ERVS71-1P61550 626 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 CXorf67Q86X51 503 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-226ENST00000533820 ZNF703Q9H7S9 590 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-226ENST00000533820 PCSK5Q92824 1860 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 TMEM238LA0A1B0GVL6 79 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 MAP1LC3B2A6NCE7 125 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 PTTG1IPP53801 180 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 ABHD17BQ5VST6 288 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 TMEM183AQ8IXX5 376 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 C1orf87Q8N0U7 546 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 MAP1LC3BQ9GZQ8 125 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 SLC25A22Q9H936 323 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 MDH2P40926 338 aaKnown RBP16.34■□□□□ 0.21
CAPN1-226ENST00000533820 DUSP3P51452 185 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-226ENST00000533820 ZNF585BQ52M93 769 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 LEMD1Q68G75 181 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 SAXO1Q8IYX7 474 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 LHX4Q969G2 390 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 TMEM45BQ96B21 275 aa16.34■□□□□ 0.21
CAPN1-226ENST00000533820 GRPP07492 148 aa16.33■□□□□ 0.21
CAPN1-226ENST00000533820 ZNF816Q0VGE8 651 aaPredicted RBP16.33■□□□□ 0.21
CAPN1-226ENST00000533820 ALKBH6Q3KRA9 238 aa16.33■□□□□ 0.21
CAPN1-226ENST00000533820 GATAD1Q8WUU5 269 aa16.33■□□□□ 0.21
CAPN1-226ENST00000533820 CLDN34H7C241 214 aa16.33■□□□□ 0.2
CAPN1-226ENST00000533820 CDIPTO14735 213 aa16.33■□□□□ 0.2
CAPN1-226ENST00000533820 CELA3BP08861 270 aa16.33■□□□□ 0.2
CAPN1-226ENST00000533820 LINC00205P59089 165 aa16.33■□□□□ 0.2
CAPN1-226ENST00000533820 CHTOPQ9Y3Y2 248 aaKnown RBP16.33■□□□□ 0.2
CAPN1-226ENST00000533820 C20orf202A1L168 122 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 RAMP3O60896 148 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 OR2H2O95918 312 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 PMS2P11Q13670 270 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 IL22RA2Q969J5 263 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 SMIM7Q9BQ49 75 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 TTTY12Q9BZ98 90 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 M0QZK8 103 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 GGCTO75223 188 aaKnown RBP16.32■□□□□ 0.2
CAPN1-226ENST00000533820 IGKV1D-33P01593 117 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 IGKV1-33P01594 117 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 RTP5Q14D33 572 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 OR1C1Q15619 314 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 SLC39A9Q9NUM3 307 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 ZNF737O75373 536 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 G6PCP35575 357 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 PMP22Q01453 160 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 FAM173AQ9BQD7 235 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 VPS25Q9BRG1 176 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms