RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CLCC1Q96S66 551 aa8.17□□□□□ -1.1
CAPN1-225ENST00000533704 MCRIP2Q9BUT9 160 aaKnown RBP8.17□□□□□ -1.1
CAPN1-225ENST00000533704 RDH8Q9NYR8 311 aa8.17□□□□□ -1.1
CAPN1-225ENST00000533704 WASHC3Q9Y3C0 194 aa8.17□□□□□ -1.1
CAPN1-225ENST00000533704 IGHV7-81A0A0B4J1V7 117 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 IGKV1-6A0A0C4DH72 117 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 IFITM5A6NNB3 132 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 H0YJW9 148 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 K7EIL1 84 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 M0R1X1 148 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 RRHO14718 337 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 FABP7O15540 132 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 FCGR3AP08637 254 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 MC5RP33032 325 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 TALDO1P37837 337 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 CDX1P47902 265 aaPredicted RBP8.16□□□□□ -1.1
CAPN1-225ENST00000533704 LINC00205P59089 165 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 ARFRP1Q13795 201 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 IGSF11Q5DX21 431 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 SPARTQ8N0X7 666 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 NPBQ8NG41 125 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 ATG5Q9H1Y0 275 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 KLK15Q9H2R5 256 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 METTL1Q9UBP6 276 aaKnown RBP8.16□□□□□ -1.1
CAPN1-225ENST00000533704 ZNF230Q9UIE0 474 aaPredicted RBP8.16□□□□□ -1.1
CAPN1-225ENST00000533704 KCNK7Q9Y2U2 307 aa8.16□□□□□ -1.1
CAPN1-225ENST00000533704 A0A1W2PN81 502 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 METTL21EPA6NDL7 271 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 ITGB1BP1O14713 200 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 MRPS14O60783 128 aaKnown RBP8.15□□□□□ -1.1
CAPN1-225ENST00000533704 NDUFA3O95167 84 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 APOA2P02652 100 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 TFAP2AP05549 437 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 GSTT2P0CG29 244 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 GSTT2BP0CG30 244 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 HIST1H1DP16402 221 aaKnown RBP8.15□□□□□ -1.1
CAPN1-225ENST00000533704 RAB6AP20340 208 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 PSMB8P28062 276 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 CHRNA7P36544 502 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 LUMP51884 338 aaPredicted RBP8.15□□□□□ -1.1
CAPN1-225ENST00000533704 RPS16P62249 146 aaKnown RBP8.15□□□□□ -1.1
CAPN1-225ENST00000533704 CX3CL1P78423 397 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 NDPQ00604 133 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 KIR2DS1Q14954 304 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 CD200R1LQ6Q8B3 271 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 RNF152Q8N8N0 203 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 OR4A4PQ8NGN8 299 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 OR5M8Q8NGP6 311 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 OR10J5Q8NHC4 309 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 CASTOR1Q8WTX7 329 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 C4orf3Q8WVX3 66 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 FAM210AQ96ND0 272 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 AGMATQ9BSE5 352 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 FAM103A1Q9BTL3 118 aaKnown RBP8.15□□□□□ -1.1
CAPN1-225ENST00000533704 GHITMQ9H3K2 345 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 GNB4Q9HAV0 340 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 FBXO7Q9Y3I1 522 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 RBM7Q9Y580 266 aaKnown RBP8.15□□□□□ -1.1
CAPN1-225ENST00000533704 SORL1Q92673 2214 aa8.15□□□□□ -1.1
CAPN1-225ENST00000533704 SEC14L6B5MCN3 397 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 RAB27BO00194 218 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 MFNGO00587 321 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 FCN1O00602 326 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 RBBP9O75884 186 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 OR8U9P0C7N5 309 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 SNRPBP14678 240 aaKnown RBP8.14□□□□□ -1.11
CAPN1-225ENST00000533704 SERPINB10P48595 397 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 EGFEM1PQ0D2K5 195 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 PSG5Q15238 335 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 UBE2UQ5VVX9 321 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 ZNF660Q6AZW8 331 aaPredicted RBP8.14□□□□□ -1.11
CAPN1-225ENST00000533704 PPP1R27Q86WC6 154 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 NR2C2APQ86WQ0 139 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 ZNF383Q8NA42 475 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 OR11H1Q8NG94 326 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 OR5AN1Q8NGI8 311 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 FCGR1BQ92637 280 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 PTX4Q96A99 478 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 TSNAXQ99598 290 aaKnown RBP8.14□□□□□ -1.11
CAPN1-225ENST00000533704 CHCHD6Q9BRQ6 235 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 GINS4Q9BRT9 223 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 OR2D2Q9H210 308 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 SLC35D1Q9NTN3 355 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 TXNL4BQ9NX01 149 aaKnown RBP8.14□□□□□ -1.11
CAPN1-225ENST00000533704 ZNF580Q9UK33 172 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 STUB1Q9UNE7 303 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 SSR3Q9UNL2 185 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 GAB2Q9UQC2 676 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 FOXA2Q9Y261 457 aaPredicted RBP8.14□□□□□ -1.11
CAPN1-225ENST00000533704 VSIG4Q9Y279 399 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 TNCP24821 2201 aa8.14□□□□□ -1.11
CAPN1-225ENST00000533704 NOTOA8MTQ0 251 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 J3QRK9 145 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 SLC25A17O43808 307 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 PROP1O75360 226 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 CA2P00918 260 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 IGKV1-16P04430 117 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 GALP22466 123 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 PPIFP30405 207 aaKnown RBP8.13□□□□□ -1.11
CAPN1-225ENST00000533704 RAB9AP51151 201 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms