RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FAM25CB3EWG5 89 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 FAM25GB3EWG6 89 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 TXNL1O43396 289 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 TMEM127O75204 238 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 DUS4LO95620 317 aaKnown RBP6.91□□□□□ -1.3
COPB1-210ENST00000533533 PTHLHP12272 177 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 RPL5P46777 297 aaKnown RBP6.91□□□□□ -1.3
COPB1-210ENST00000533533 OR3A3P47888 321 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 ZNF816Q0VGE8 651 aaPredicted RBP6.91□□□□□ -1.3
COPB1-210ENST00000533533 CTF1Q16619 201 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 PNLIPRP3Q17RR3 467 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 ZNF260Q3ZCT1 412 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 ABCA11PQ4W5N1 156 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 TMEM69Q5SWH9 247 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 MZT2AQ6P582 158 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 CENPVQ7Z7K6 275 aaPredicted RBP6.91□□□□□ -1.3
COPB1-210ENST00000533533 AP3S1Q92572 193 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 WWC2-AS2Q96NR7 200 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 S1PR3Q99500 378 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 PARP12Q9H0J9 701 aaKnown RBP6.91□□□□□ -1.3
COPB1-210ENST00000533533 C11orf54Q9H0W9 315 aaPredicted RBP6.91□□□□□ -1.3
COPB1-210ENST00000533533 RDH8Q9NYR8 311 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 PIPOXQ9P0Z9 390 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 ZNF221Q9UK13 617 aa6.91□□□□□ -1.3
COPB1-210ENST00000533533 MRPS7Q9Y2R9 242 aaKnown RBP6.91□□□□□ -1.3
COPB1-210ENST00000533533 IGKV1D-8A0A087WSZ0 117 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 SAA2-SAA4A0A096LPE2 208 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 A0A0A6YYH2 397 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 IGKV1-6A0A0C4DH72 117 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 MEIS3P1A6NDR6 274 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 A6NJ64 397 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 ZNF736B4DX44 427 aaPredicted RBP6.9□□□□□ -1.3
COPB1-210ENST00000533533 RAB29O14966 203 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 LANCL1O43813 399 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 HPGDSO60760 199 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 OR2F2O95006 317 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 SAA2P0DJI9 122 aaPredicted RBP6.9□□□□□ -1.3
COPB1-210ENST00000533533 DTYMKP23919 212 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 SOX6P35712 828 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 GPR12P47775 334 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 ARPC4P59998 168 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 CD69Q07108 199 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 EGFEM1PQ0D2K5 195 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 SPCS2Q15005 226 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 RPL39P5Q59GN2 51 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 C16orf82Q7Z2V1 217 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 OR2T10Q8NGZ9 312 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 ACOT12Q8WYK0 555 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 ST6GALNAC6Q969X2 333 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 RBMXL1Q96E39 390 aaKnown RBP6.9□□□□□ -1.3
COPB1-210ENST00000533533 RBM14Q96PK6 669 aaKnown RBP6.9□□□□□ -1.3
COPB1-210ENST00000533533 MRPL20Q9BYC9 149 aaKnown RBP6.9□□□□□ -1.3
COPB1-210ENST00000533533 IFI27L2Q9H2X8 130 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 AUNIPQ9H7T9 357 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 IFT46Q9NQC8 304 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 MOB4Q9Y3A3 225 aa6.9□□□□□ -1.3
COPB1-210ENST00000533533 H7C2Y5 167 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 RGS5O15539 181 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 XRCC3O43542 346 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 SSX5O60225 188 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 MOSP00540 346 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 EIF4EP06730 217 aaKnown RBP6.89□□□□□ -1.31
COPB1-210ENST00000533533 OR8U9P0C7N5 309 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 ZNF182P17025 639 aaPredicted RBP6.89□□□□□ -1.31
COPB1-210ENST00000533533 CD1BP29016 333 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 HOXD3P31249 432 aaPredicted RBP6.89□□□□□ -1.31
COPB1-210ENST00000533533 TAS2R20P59543 309 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 LY6G6FQ5SQ64 297 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 GLDNQ6ZMI3 551 aaPredicted RBP6.89□□□□□ -1.31
COPB1-210ENST00000533533 THNSL2Q86YJ6 484 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 SNX29P2Q8IUI4 249 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 ODF3L1Q8IXM7 274 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 GVQW1Q8N7I0 195 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 BEST4Q8NFU0 473 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 OR4X2Q8NGF9 303 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 OR8U1Q8NH10 309 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 RAB2BQ8WUD1 216 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 EAF1Q96JC9 268 aaPredicted RBP6.89□□□□□ -1.31
COPB1-210ENST00000533533 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 NABP2Q9BQ15 211 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 OR2D2Q9H210 308 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 ABCG5Q9H222 651 aa6.89□□□□□ -1.31
COPB1-210ENST00000533533 TRBV6-7A0A0A0MS04 114 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 FAM90A9PA6NNJ1 464 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 M0QZK8 103 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 M0R1X1 148 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 APOA1P02647 267 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 CTXN2P0C2S0 81 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 NFYAP23511 347 aaPredicted RBP6.88□□□□□ -1.31
COPB1-210ENST00000533533 CBX5P45973 191 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 ZNF137PP52743 207 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 TMBIM6P55061 237 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 LSAMPQ13449 338 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 SRSF7Q16629 238 aaKnown RBP eCLIP6.88□□□□□ -1.31
COPB1-210ENST00000533533 RNASE12Q5GAN4 147 aaKnown RBP6.88□□□□□ -1.31
COPB1-210ENST00000533533 KHDC1LQ5JSQ8 128 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 CNIH2Q6PI25 160 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 C10orf99Q6UWK7 81 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 FAM131AQ6UXB0 335 aa6.88□□□□□ -1.31
COPB1-210ENST00000533533 ZNF833PQ6ZTB9 187 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms