RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PRB2P02812 416 aaPredicted RBP23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 RPLP1P05386 114 aaKnown RBP23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 ELANEP08246 267 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 SDC2P34741 201 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 ARFRP1Q13795 201 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 ARL6IP1Q15041 203 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 IGSF11Q5DX21 431 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 CXorf66Q5JRM2 361 aaPredicted RBP23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 LIN54Q6MZP7 749 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 SFXN4Q6P4A7 337 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 C8orf86Q6ZUL3 223 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 ZNF695Q8IW36 515 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 LINC00482Q8N8I6 264 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 RNF152Q8N8N0 203 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 MAFIPQ8WZ33 124 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 WASHC3Q9Y3C0 194 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 IGHG4P01861 327 aa23.75■■□□□ 1.39
SSSCA1-207ENST00000533115 OR5H8P0DN80 308 aa23.75■■□□□ 1.39
SSSCA1-207ENST00000533115 TALDO1P37837 337 aa23.75■■□□□ 1.39
SSSCA1-207ENST00000533115 THBS3P49746 956 aa23.75■■□□□ 1.39
SSSCA1-207ENST00000533115 OR10J5Q8NHC4 309 aa23.75■■□□□ 1.39
SSSCA1-207ENST00000533115 RCC1LQ96I51 464 aaKnown RBP23.75■■□□□ 1.39
SSSCA1-207ENST00000533115 OR51J1Q9H342 316 aa23.75■■□□□ 1.39
SSSCA1-207ENST00000533115 TRBV6-7A0A0A0MS04 114 aa23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 IGHV7-81A0A0B4J1V7 117 aa23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 H7C2Y5 167 aa23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 RBBP9O75884 186 aa23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 DIRAS3O95661 229 aa23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 CD36P16671 472 aa23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 SRSF7Q16629 238 aaKnown RBP eCLIP23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 LCNL1Q6ZST4 164 aa23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 MRPL41Q8IXM3 137 aaKnown RBP23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 DRAXINQ8NBI3 349 aaPredicted RBP23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 RNF167Q9H6Y7 350 aa23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP23.74■■□□□ 1.39
SSSCA1-207ENST00000533115 LOC100506127A0A0U1RQW1 187 aa23.73■■□□□ 1.39
SSSCA1-207ENST00000533115 GSTP1P09211 210 aaKnown RBP23.73■■□□□ 1.39
SSSCA1-207ENST00000533115 SNRPBP14678 240 aaKnown RBP23.73■■□□□ 1.39
SSSCA1-207ENST00000533115 CDNFQ49AH0 187 aa23.73■■□□□ 1.39
SSSCA1-207ENST00000533115 REC114Q7Z4M0 266 aa23.73■■□□□ 1.39
SSSCA1-207ENST00000533115 NECAP2Q9NVZ3 263 aa23.73■■□□□ 1.39
SSSCA1-207ENST00000533115 ELF5Q9UKW6 265 aaPredicted RBP23.73■■□□□ 1.39
SSSCA1-207ENST00000533115 RRHO14718 337 aa23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 ATP6V0E1O15342 81 aa23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 CLEC2LP0C7M8 214 aa23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 MYCNOSP40205 109 aa23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 MXD1Q05195 221 aa23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 FOXB2Q5VYV0 432 aa23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 Q6ZS49 121 aa23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 ZNF436-AS1Q8NC38 126 aaPredicted RBP23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 RNF5Q99942 180 aa23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 FBXL15Q9H469 300 aa23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 PARP11Q9NR21 331 aa23.72■■□□□ 1.39
SSSCA1-207ENST00000533115 DUS4LO95620 317 aaKnown RBP23.71■■□□□ 1.39
SSSCA1-207ENST00000533115 TFAP2AP05549 437 aa23.71■■□□□ 1.39
SSSCA1-207ENST00000533115 ZNF383Q8NA42 475 aa23.71■■□□□ 1.39
SSSCA1-207ENST00000533115 LGALS14Q8TCE9 139 aa23.71■■□□□ 1.39
SSSCA1-207ENST00000533115 CENPOQ9BU64 300 aa23.71■■□□□ 1.39
SSSCA1-207ENST00000533115 WSB1Q9Y6I7 421 aa23.71■■□□□ 1.39
SSSCA1-207ENST00000533115 SCGNO76038 276 aa23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 OR8U9P0C7N5 309 aa23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 DTYMKP23919 212 aa23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 PSMB8P28062 276 aa23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 PPIFP30405 207 aaKnown RBP23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 CDX1P47902 265 aaPredicted RBP23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 LINC00205P59089 165 aa23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 HACD4Q5VWC8 232 aa23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 OR8U1Q8NH10 309 aa23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 P2RX4Q99571 388 aa23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 OR2D2Q9H210 308 aa23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 GAB2Q9UQC2 676 aa23.7■■□□□ 1.38
SSSCA1-207ENST00000533115 G3V318 75 aa23.69■■□□□ 1.38
SSSCA1-207ENST00000533115 M0R1X1 148 aa23.69■■□□□ 1.38
SSSCA1-207ENST00000533115 PLGLAQ15195 96 aa23.69■■□□□ 1.38
SSSCA1-207ENST00000533115 GINS4Q9BRT9 223 aa23.69■■□□□ 1.38
SSSCA1-207ENST00000533115 IGKV1D-8A0A087WSZ0 117 aa23.68■■□□□ 1.38
SSSCA1-207ENST00000533115 TRAV41A0A0B4J266 112 aa23.68■■□□□ 1.38
SSSCA1-207ENST00000533115 APOA2P02652 100 aa23.68■■□□□ 1.38
SSSCA1-207ENST00000533115 IGKV1-16P04430 117 aa23.68■■□□□ 1.38
SSSCA1-207ENST00000533115 ZNF660Q6AZW8 331 aaPredicted RBP23.68■■□□□ 1.38
SSSCA1-207ENST00000533115 RAX2Q96IS3 184 aa23.68■■□□□ 1.38
SSSCA1-207ENST00000533115 SDHAF2Q9NX18 166 aa23.68■■□□□ 1.38
SSSCA1-207ENST00000533115 SCAND1P57086 179 aa23.67■■□□□ 1.38
SSSCA1-207ENST00000533115 PDPNQ86YL7 162 aa23.67■■□□□ 1.38
SSSCA1-207ENST00000533115 DUX3Q96PT4 197 aa23.67■■□□□ 1.38
SSSCA1-207ENST00000533115 AURKAIP1Q9NWT8 199 aaPredicted RBP23.67■■□□□ 1.38
SSSCA1-207ENST00000533115 RHBDL2Q9NX52 303 aa23.67■■□□□ 1.38
SSSCA1-207ENST00000533115 CCL24O00175 119 aa23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 FCN1O00602 326 aa23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 RPS16P62249 146 aaKnown RBP23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 CX3CL1P78423 397 aa23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 NDPQ00604 133 aa23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 PSG5Q15238 335 aa23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 ZNF260Q3ZCT1 412 aa23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 IDNKQ5T6J7 187 aa23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 TSNAXQ99598 290 aaKnown RBP23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 ST6GALNAC5Q9BVH7 336 aa23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 DCSTAMPQ9H295 470 aa23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 METTL1Q9UBP6 276 aaKnown RBP23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 RBM7Q9Y580 266 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms