RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PMS2P11Q13670 270 aa9.89□□□□□ -0.83
COPB1-209ENST00000533096 SMN1Q16637 294 aaKnown RBP9.89□□□□□ -0.83
COPB1-209ENST00000533096 GUCA2BQ16661 112 aa9.89□□□□□ -0.83
COPB1-209ENST00000533096 RPEL1Q2QD12 228 aa9.89□□□□□ -0.83
COPB1-209ENST00000533096 Q499Y3 187 aa9.89□□□□□ -0.83
COPB1-209ENST00000533096 OR10K2Q6IF99 312 aa9.89□□□□□ -0.83
COPB1-209ENST00000533096 TSNAXQ99598 290 aaKnown RBP9.89□□□□□ -0.83
COPB1-209ENST00000533096 COA4Q9NYJ1 87 aa9.89□□□□□ -0.83
COPB1-209ENST00000533096 CLEC2DQ9UHP7 191 aa9.89□□□□□ -0.83
COPB1-209ENST00000533096 LOC100130705A0A1B0GUX0 176 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 CIB2O75838 187 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 RBBP9O75884 186 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 LALBAP00709 142 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 CD7P09564 240 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 PJVKQ0ZLH3 352 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 LY6G6FQ5SQ64 297 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 LINC00322Q6ZN03 302 aaPredicted RBP9.88□□□□□ -0.83
COPB1-209ENST00000533096 C6orf201Q7Z4U5 140 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 ZNF554Q86TJ5 538 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 BVESQ8NE79 360 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 OR5AN1Q8NGI8 311 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 SMIM19Q96E16 107 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 Q96M66 194 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 OR14A2Q96R54 314 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 RNF5Q99942 180 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 THAP7Q9BT49 309 aaPredicted RBP9.88□□□□□ -0.83
COPB1-209ENST00000533096 C11orf54Q9H0W9 315 aaPredicted RBP9.88□□□□□ -0.83
COPB1-209ENST00000533096 WFDC10AQ9H1F0 79 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 FGF20Q9NP95 211 aaPredicted RBP9.88□□□□□ -0.83
COPB1-209ENST00000533096 MRPS18AQ9NVS2 196 aaKnown RBP9.88□□□□□ -0.83
COPB1-209ENST00000533096 SLC2A8Q9NY64 477 aa9.88□□□□□ -0.83
COPB1-209ENST00000533096 TRBV5-5A0A0J9YX44 114 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 CXorf65A6NEN9 183 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 FAM90A7PA6NKC0 464 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 FAM90A23PA8MXZ1 464 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 OR11H12B2RN74 326 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 H3BNX3 289 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 IGKV1-16P04430 117 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 LGALS7P47929 136 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 RPS11P62280 158 aaKnown RBP eCLIP9.87□□□□□ -0.83
COPB1-209ENST00000533096 HMGN3Q15651 99 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 MOGAT2Q3SYC2 334 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 CD300EQ496F6 205 aaPredicted RBP9.87□□□□□ -0.83
COPB1-209ENST00000533096 PHB2Q99623 299 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 ST6GALNAC5Q9BVH7 336 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 SRD5A3Q9H8P0 318 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 OR1A1Q9P1Q5 309 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 ZNF221Q9UK13 617 aa9.87□□□□□ -0.83
COPB1-209ENST00000533096 STARD9Q9P2P6 4700 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 MSGN1A6NI15 193 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 ZNF785A8K8V0 405 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 PROP1O75360 226 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 MYL12AP19105 171 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 AADACP22760 399 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 DCKP27707 260 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 RASSF2P50749 326 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 YIF1BQ5BJH7 314 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 FAM71F2Q6NXP2 309 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 ZNF343Q6P1L6 599 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 ZNF383Q8NA42 475 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 DYNLRB2Q8TF09 96 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 APH1BQ8WW43 257 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 LINC00476Q8WZB0 136 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 SNAPC3Q92966 411 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 SLC29A1Q99808 456 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 PEMTQ9UBM1 199 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 DNAH7Q8WXX0 4024 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 HYDINQ4G0P3 5121 aa9.86□□□□□ -0.83
COPB1-209ENST00000533096 TRBV5-7A0A0A0MS05 114 aa9.85□□□□□ -0.83
COPB1-209ENST00000533096 A0A0B4J203 849 aa9.85□□□□□ -0.83
COPB1-209ENST00000533096 H3BUA1 57 aa9.85□□□□□ -0.83
COPB1-209ENST00000533096 DYNC1I1O14576 645 aa9.85□□□□□ -0.83
COPB1-209ENST00000533096 PRH1P02810 166 aa9.85□□□□□ -0.83
COPB1-209ENST00000533096 ZBTB25P24278 435 aa9.85□□□□□ -0.83
COPB1-209ENST00000533096 HTR2CP28335 458 aa9.85□□□□□ -0.83
COPB1-209ENST00000533096 TINAGL1Q9GZM7 467 aaPredicted RBP9.85□□□□□ -0.83
COPB1-209ENST00000533096 PLEKHJ1Q9NW61 149 aa9.85□□□□□ -0.83
COPB1-209ENST00000533096 M0R1X1 148 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 MPPED1O15442 326 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 RBMXL2O75526 392 aaKnown RBP9.84□□□□□ -0.83
COPB1-209ENST00000533096 APOA2P02652 100 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 SCTP09683 121 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 MECP2P51608 486 aaKnown RBP9.84□□□□□ -0.83
COPB1-209ENST00000533096 CDH26Q8IXH8 852 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 SVOPQ8N4V2 548 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 DDB2Q92466 427 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 USMG5Q96IX5 58 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 AGMATQ9BSE5 352 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 HDHD3Q9BSH5 251 aaPredicted RBP9.84□□□□□ -0.83
COPB1-209ENST00000533096 SLC35D1Q9NTN3 355 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 SIGLEC8Q9NYZ4 499 aa9.84□□□□□ -0.83
COPB1-209ENST00000533096 WBP4O75554 376 aaKnown RBP9.83□□□□□ -0.84
COPB1-209ENST00000533096 SPDEFO95238 335 aa9.83□□□□□ -0.84
COPB1-209ENST00000533096 EDN2P20800 178 aa9.83□□□□□ -0.84
COPB1-209ENST00000533096 SSBP2P81877 361 aaPredicted RBP9.83□□□□□ -0.84
COPB1-209ENST00000533096 ATP5G2Q06055 141 aa9.83□□□□□ -0.84
COPB1-209ENST00000533096 DEFB114Q30KQ6 69 aa9.83□□□□□ -0.84
COPB1-209ENST00000533096 EDARADDQ8WWZ3 215 aa9.83□□□□□ -0.84
COPB1-209ENST00000533096 WDR89Q96FK6 387 aaPredicted RBP9.83□□□□□ -0.84
COPB1-209ENST00000533096 TMEM80Q96HE8 168 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms