RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 FDX2Q6P4F2 183 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 TEPPQ6URK8 271 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 GVQW1Q8N7I0 195 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 ZNF488Q96MN9 340 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 IGSF23A1L1A6 192 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 LMX1BO60663 402 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 LY6EQ16553 131 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 MRPL14Q6P1L8 145 aaKnown RBP9.24□□□□□ -0.93
COLCA1-203ENST00000532918 HOGA1Q86XE5 327 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 OR10J6PQ8NGY7 276 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 PRSS27Q9BQR3 290 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 A0A1W2PPE3 182 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 OR2A4O95047 310 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 CFDP00746 253 aaPredicted RBP9.24□□□□□ -0.93
COLCA1-203ENST00000532918 ZNF708P17019 499 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 PTGDSP41222 190 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 C10orf128Q5T292 105 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 STPG2Q8N412 459 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 FAM169BQ8N8A8 192 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 C5orf17Q8NAS9 161 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 OR2A7Q96R45 310 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 SIRT7Q9NRC8 400 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 CHCHD2Q9Y6H1 151 aaPredicted RBP9.24□□□□□ -0.93
COLCA1-203ENST00000532918 ZNF737O75373 536 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 ZFP36L1Q07352 338 aaKnown RBP9.24□□□□□ -0.93
COLCA1-203ENST00000532918 FAM27E3Q08E93 113 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 FAM222BQ8WU58 562 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 RAB37Q96AX2 223 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 SSBP3Q9BWW4 388 aaPredicted RBP9.24□□□□□ -0.93
COLCA1-203ENST00000532918 COL25A1Q9BXS0 654 aaPredicted RBP9.24□□□□□ -0.93
COLCA1-203ENST00000532918 TMEM106BQ9NUM4 274 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 JPT1Q9UK76 154 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 DOCK5Q9H7D0 1870 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 CENPVL1A0A0U1RR11 272 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 HYPMO75409 117 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 IGHMP01871 453 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 NRN1LQ496H8 165 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 OR4X2Q8NGF9 303 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 OR4P4Q8NGL7 312 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 DDB2Q92466 427 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 UFC1Q9Y3C8 167 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 TRPM7Q96QT4 1865 aa9.24□□□□□ -0.93
COLCA1-203ENST00000532918 RAB9AP51151 201 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 CTF1Q16619 201 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 TBR1Q16650 682 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 IMMP1LQ96LU5 166 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 COX6CP09669 75 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 MFAP4P55083 255 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 ERVS71-1P61550 626 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 RPL8P62917 257 aaKnown RBP9.23□□□□□ -0.93
COLCA1-203ENST00000532918 KLF9Q13886 244 aaPredicted RBP9.23□□□□□ -0.93
COLCA1-203ENST00000532918 LRRC75BQ2VPJ9 315 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 TM4SF20Q53R12 229 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 RTN4RL2Q86UN3 420 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 OR4C13Q8NGP0 309 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 KCNK15Q9H427 330 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 ZNFX1Q9P2E3 1918 aaKnown RBP9.23□□□□□ -0.93
COLCA1-203ENST00000532918 hCG_38984A0A1B0GV85 526 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 ISLRO14498 428 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 SELENOTP62341 195 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 POLR2GP62487 172 aaKnown RBP eCLIP9.23□□□□□ -0.93
COLCA1-203ENST00000532918 ZNF645Q8N7E2 425 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 MRGPRFQ96AM1 343 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 ABHD1Q96SE0 405 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 MRPS18AQ9NVS2 196 aaKnown RBP9.23□□□□□ -0.93
COLCA1-203ENST00000532918 KCNAB3O43448 404 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 TGFAP01135 160 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 HIST1H1BP16401 226 aaKnown RBP9.23□□□□□ -0.93
COLCA1-203ENST00000532918 RELQ04864 619 aaPredicted RBP9.23□□□□□ -0.93
COLCA1-203ENST00000532918 INSL4Q14641 139 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 ADIPOQQ15848 244 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 APCDD1LQ8NCL9 501 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 EEF1AKMT3Q96AZ1 226 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 LY6DQ14210 128 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 AWAT1Q58HT5 328 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 SLC35E4Q6ICL7 350 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 ZNF826PQ6ZT77 177 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 SNRNP40Q96DI7 357 aaKnown RBP9.23□□□□□ -0.93
COLCA1-203ENST00000532918 TBX15Q96SF7 602 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 CBLN4Q9NTU7 201 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 ST6GALNAC2Q9UJ37 374 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 NEUROG3Q9Y4Z2 214 aa9.23□□□□□ -0.93
COLCA1-203ENST00000532918 MYO16Q9Y6X6 1858 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 MPC2O95563 127 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 CA2P00918 260 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 BSPH1Q075Z2 132 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 SYT8Q8NBV8 401 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 VN1R17PQ8TDU5 208 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 C16orf92Q96LL3 132 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 WNT5BQ9H1J7 359 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 IGKV3D-11A0A0A0MRZ8 115 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 TRAV39A0A0B4J263 110 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 TMEM238LA0A1B0GVL6 79 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 A6NJY4 79 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 NTN3O00634 580 aaPredicted RBP9.22□□□□□ -0.93
COLCA1-203ENST00000532918 MELTFP08582 738 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 PSG5Q15238 335 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 CLEC18BQ6UXF7 455 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 C12orf54Q6X4T0 127 aa9.22□□□□□ -0.93
COLCA1-203ENST00000532918 PNKDQ8N490 385 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms