RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 MINDY2Q8NBR6 621 aa12.32□□□□□ -0.44
LDLRAD3-205ENST00000532490 C4orf3Q8WVX3 66 aa12.32□□□□□ -0.44
LDLRAD3-205ENST00000532490 EDARADDQ8WWZ3 215 aa12.32□□□□□ -0.44
LDLRAD3-205ENST00000532490 FBXO7Q9Y3I1 522 aa12.32□□□□□ -0.44
LDLRAD3-205ENST00000532490 TRAV41A0A0B4J266 112 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 RAB27BO00194 218 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 FCN1O00602 326 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 RRHO14718 337 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 HSPA12AO43301 675 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 CRIP2P52943 208 aaPredicted RBP12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 LINC00205P59089 165 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 UBE2UQ5VVX9 321 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 ZNF491Q8N8L2 437 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 RNF5Q99942 180 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 FBXL15Q9H469 300 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 PARP11Q9NR21 331 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 RNF150Q9ULK6 438 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 WASHC3Q9Y3C0 194 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 COL7A1Q02388 2944 aa12.31□□□□□ -0.44
LDLRAD3-205ENST00000532490 A0A0B4J203 849 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 I3L521 148 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 MFNGO00587 321 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 RBBP9O75884 186 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 EGR2P11161 476 aaPredicted RBP12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 SNRPBP14678 240 aaKnown RBP12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 RAB3BP20337 219 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 RAB6AP20340 208 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 RUNX1Q01196 453 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 ZNF660Q6AZW8 331 aaPredicted RBP12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 SPARTQ8N0X7 666 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 ZNF383Q8NA42 475 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 DRAXINQ8NBI3 349 aaPredicted RBP12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 OR4A4PQ8NGN8 299 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 OR10R2Q8NGX6 335 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 DPF1Q92782 380 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 RAB3CQ96E17 227 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 GNB4Q9HAV0 340 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 RDH8Q9NYR8 311 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 NUBP2Q9Y5Y2 271 aa12.3□□□□□ -0.44
LDLRAD3-205ENST00000532490 FABP7O15540 132 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 SOX15O60248 233 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 FCGR3AP08637 254 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 CD3GP09693 182 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 GNB3P16520 340 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 MYL9P24844 172 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 RAB9AP51151 201 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 CX3CL1P78423 397 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 IGSF11Q5DX21 431 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 ASPHD1Q5U4P2 390 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 C22orf42Q6IC83 251 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 OR5M8Q8NGP6 311 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 CABLES2Q9BTV7 478 aa12.29□□□□□ -0.44
LDLRAD3-205ENST00000532490 TRBV6-7A0A0A0MS04 114 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 H7C2Y5 167 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 IGKV1-16P04430 117 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 GSTP1P09211 210 aaKnown RBP12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 GSTT2P0CG29 244 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 GSTT2BP0CG30 244 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 HIST1H1DP16402 221 aaKnown RBP12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 FGF9P31371 208 aaPredicted RBP12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 SERPINB10P48595 397 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 RAB25P57735 213 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 PSG5Q15238 335 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 TMEM65Q6PI78 240 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 OR11H1Q8NG94 326 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 TXNL4BQ9NX01 149 aaKnown RBP12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 SCOCQ9UIL1 159 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 ZNF221Q9UK13 617 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 GAB2Q9UQC2 676 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 VSIG4Q9Y279 399 aa12.28□□□□□ -0.44
LDLRAD3-205ENST00000532490 DIRAS3O95661 229 aa12.27□□□□□ -0.45
LDLRAD3-205ENST00000532490 TFAP2AP05549 437 aa12.27□□□□□ -0.45
LDLRAD3-205ENST00000532490 LUMP51884 338 aaPredicted RBP12.27□□□□□ -0.45
LDLRAD3-205ENST00000532490 GNB1P62873 340 aa12.27□□□□□ -0.45
LDLRAD3-205ENST00000532490 SRSF7Q16629 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
LDLRAD3-205ENST00000532490 DEFB121Q5J5C9 76 aa12.27□□□□□ -0.45
LDLRAD3-205ENST00000532490 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.27□□□□□ -0.45
LDLRAD3-205ENST00000532490 C5orf30Q96GV9 206 aa12.27□□□□□ -0.45
LDLRAD3-205ENST00000532490 YTHDF1Q9BYJ9 559 aaKnown RBP12.27□□□□□ -0.45
LDLRAD3-205ENST00000532490 ZNF230Q9UIE0 474 aaPredicted RBP12.27□□□□□ -0.45
LDLRAD3-205ENST00000532490 GADD45AP24522 165 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 MRPS15P82914 257 aaKnown RBP12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 DGCR2P98153 550 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 ECSCRQ19T08 205 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 C9orf66Q5T8R8 295 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 ZNF562Q6V9R5 426 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 Q6ZS49 121 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 PDPNQ86YL7 162 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 TCTEX1D1Q8N7M0 179 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 OR1N2Q8NGR9 330 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 MAFIPQ8WZ33 124 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 SDHAF2Q9NX18 166 aa12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 METTL1Q9UBP6 276 aaKnown RBP12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 ELF5Q9UKW6 265 aaPredicted RBP12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 FOXA2Q9Y261 457 aaPredicted RBP12.26□□□□□ -0.45
LDLRAD3-205ENST00000532490 A0A075B6Q4 140 aa12.25□□□□□ -0.45
LDLRAD3-205ENST00000532490 IGKV1D-8A0A087WSZ0 117 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms