RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ABHD14AQ9BUJ0 271 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 RCC2Q9P258 522 aaKnown RBP6.81□□□□□ -1.32
USF1-210ENST00000531842 ZNF580Q9UK33 172 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 FOXA2Q9Y261 457 aaPredicted RBP6.81□□□□□ -1.32
USF1-210ENST00000531842 CEPT1Q9Y6K0 416 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 VPS13DQ5THJ4 4388 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 SHISA3A0PJX4 238 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 MYL12BO14950 172 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 PDCD6O75340 191 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 GLAP06280 429 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 CD7P09564 240 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 SYNJ2BPP57105 145 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 TAS2R43P59537 309 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 RPS25P62851 125 aaKnown RBP6.8□□□□□ -1.32
USF1-210ENST00000531842 TPBGQ13641 420 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 MORN2Q502X0 79 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 ACSM3Q53FZ2 586 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 LIPKQ5VXJ0 399 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 UNQ5815/PRO19632Q6UWF5 114 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 LINC00322Q6ZN03 302 aaPredicted RBP6.8□□□□□ -1.32
USF1-210ENST00000531842 LFNGQ8NES3 379 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 IL1F10Q8WWZ1 152 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 DDB2Q92466 427 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 GALMQ96C23 342 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 RHOVQ96L33 236 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 NEDD4LQ96PU5 975 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 MND1Q9BWT6 205 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 PARP12Q9H0J9 701 aaKnown RBP6.8□□□□□ -1.32
USF1-210ENST00000531842 CST11Q9H112 138 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 VCXQ9H320 206 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 KCNK15Q9H427 330 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 ABRACLQ9P1F3 81 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 JPT1Q9UK76 154 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 LRRC42Q9Y546 428 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 NUBP2Q9Y5Y2 271 aa6.8□□□□□ -1.32
USF1-210ENST00000531842 MUC4Q99102 2169 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 FAM90A7PA6NKC0 464 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 FAM90A23PA8MXZ1 464 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 SLC25A17O43808 307 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 RBMXL2O75526 392 aaKnown RBP6.79□□□□□ -1.32
USF1-210ENST00000531842 GSTP1P09211 210 aaKnown RBP6.79□□□□□ -1.32
USF1-210ENST00000531842 UCHL1P09936 223 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 LINC00205P59089 165 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 QRFPP83859 136 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 MED22Q15528 200 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 SSX1Q16384 188 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 C1orf100Q5SVJ3 147 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 OR10K2Q6IF99 312 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 FAM131AQ6UXB0 335 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 PRSS48Q7RTY5 328 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 PPP1R27Q86WC6 154 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 CDH26Q8IXH8 852 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 GAPTQ8N292 157 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 SETD6Q8TBK2 473 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 MRPL30Q8TCC3 161 aaKnown RBP6.79□□□□□ -1.32
USF1-210ENST00000531842 TMEM203Q969S6 136 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 CNBD2Q96M20 576 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 Q96M66 194 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 ST6GALNAC5Q9BVH7 336 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 ELOVL1Q9BW60 279 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 CHMP1AQ9HD42 196 aaPredicted RBP6.79□□□□□ -1.32
USF1-210ENST00000531842 GHRLQ9UBU3 117 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 STEAP1Q9UHE8 339 aa6.79□□□□□ -1.32
USF1-210ENST00000531842 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 SAA2-SAA4A0A096LPE2 208 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 A0A0A6YYD4 124 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 H7C2Y5 167 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 ST8SIA5O15466 376 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 RGS10O43665 173 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 YPEL1O60688 119 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 NDUFA3O95167 84 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 TRGV3P03979 118 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 CSN3P07498 182 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 SAA2P0DJI9 122 aaPredicted RBP6.78□□□□□ -1.32
USF1-210ENST00000531842 CPEP16870 476 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 MAPK3P27361 379 aaPredicted RBP6.78□□□□□ -1.32
USF1-210ENST00000531842 CD40LGP29965 261 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 CD81P60033 236 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 HTD2P86397 168 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 FABP5Q01469 135 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 TMEM267Q0VDI3 215 aaPredicted RBP6.78□□□□□ -1.32
USF1-210ENST00000531842 PLA2G7Q13093 441 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 UNC119Q13432 240 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 KLF5Q13887 457 aaPredicted RBP6.78□□□□□ -1.32
USF1-210ENST00000531842 ACTBL2Q562R1 376 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 RPL39P5Q59GN2 51 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 ZNF660Q6AZW8 331 aaPredicted RBP6.78□□□□□ -1.32
USF1-210ENST00000531842 ZNF833PQ6ZTB9 187 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 ZNF554Q86TJ5 538 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 NKAIN3Q8N8D7 197 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 NPBQ8NG41 125 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 OR5T1Q8NG75 326 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 OR9G4Q8NGQ1 327 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 THRSPQ92748 146 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 FLYWCH2Q96CP2 140 aaKnown RBP6.78□□□□□ -1.32
USF1-210ENST00000531842 YPEL2Q96QA6 119 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 UQCC2Q9BRT2 126 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 FAAP24Q9BTP7 215 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 ZNF355PQ9NSJ1 428 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 MBNL3Q9NUK0 354 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms