RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 SEC14L6B5MCN3 397 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 GGTLC3B5MD39 225 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 K7ERS5 55 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 SLC31A1O15431 190 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 PSCAO43653 123 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 NIPSNAP2O75323 286 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 CIAO1O76071 339 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 MLNP12872 115 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 RPL31P62899 125 aaKnown RBP1.54□□□□□ -2.16
CD44-233ENST00000531141 TNNC1P63316 161 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 CTAG1AP78358 180 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 XIAPP98170 497 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 GPR176Q14439 515 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 PSG3Q16557 428 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 C18orf21Q32NC0 220 aaPredicted RBP1.54□□□□□ -2.16
CD44-233ENST00000531141 DUPD1Q68J44 220 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 UGT2A3Q6UWM9 527 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 TMPPEQ6ZT21 453 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 OR51L1Q8NGJ5 315 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 CCDC124Q96CT7 223 aaKnown RBP1.54□□□□□ -2.16
CD44-233ENST00000531141 ZNF75AQ96N20 296 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 QKIQ96PU8 341 aaKnown RBP eCLIP1.54□□□□□ -2.16
CD44-233ENST00000531141 METTL26Q96S19 204 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 RAB1BQ9H0U4 201 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 TXNIPQ9H3M7 391 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 DDIT4Q9NX09 232 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 GINS2Q9Y248 185 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 KPTNQ9Y664 436 aa1.54□□□□□ -2.16
CD44-233ENST00000531141 PDCD11Q14690 1871 aaKnown RBP1.54□□□□□ -2.16
CD44-233ENST00000531141 ZFC3H1O60293 1989 aaKnown RBP1.54□□□□□ -2.16
CD44-233ENST00000531141 EPPK1P58107 5090 aaKnown RBP1.53□□□□□ -2.16
CD44-233ENST00000531141 VWA8A3KMH1 1905 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 RAB19A4D1S5 217 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 UPK2O00526 184 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 DHRS3O75911 302 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 CDS2O95674 445 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 LDOC1O95751 146 aaPredicted RBP1.53□□□□□ -2.16
CD44-233ENST00000531141 CRATP43155 626 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 TPBGQ13641 420 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 SSX1Q16384 188 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 TMEM241Q24JQ0 296 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 TTMPQ5BVD1 217 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 CLEC12AQ5QGZ9 265 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 C8orf74Q6P047 294 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 TPGS1Q6ZTW0 290 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 PID1Q7Z2X4 250 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 CYP4Z2PQ8N1L4 340 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 CA13Q8N1Q1 262 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 ARHGAP18Q8N392 663 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 FAM131CQ96AQ9 280 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 FXYD5Q96DB9 178 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 CENPNQ96H22 339 aaPredicted RBP1.53□□□□□ -2.16
CD44-233ENST00000531141 MBOAT7Q96N66 472 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 ZNF396Q96N95 335 aaPredicted RBP1.53□□□□□ -2.16
CD44-233ENST00000531141 YPEL4Q96NS1 127 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 PCDH15Q96QU1 1955 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 LLPHQ9BRT6 129 aaKnown RBP1.53□□□□□ -2.16
CD44-233ENST00000531141 HIGD2AQ9BW72 106 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 SLC38A1Q9H2H9 487 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 ASCL3Q9NQ33 180 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 UBAP1Q9NZ09 502 aa1.53□□□□□ -2.16
CD44-233ENST00000531141 PKDREJQ9NTG1 2253 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 TNRC6BQ9UPQ9 1833 aaKnown RBP1.52□□□□□ -2.17
CD44-233ENST00000531141 NSD1Q96L73 2696 aaPredicted RBP1.52□□□□□ -2.17
CD44-233ENST00000531141 ABCB11O95342 1321 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 GOLGA8QA0A0J9YX86 632 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 A0A1B0GTI1 187 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 LOC389332A0A1B0GUA5 103 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 SDHAF1A6NFY7 115 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 CD300LBA8K4G0 201 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 C3orf84H3BNL1 204 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 CALUO43852 315 aaPredicted RBP1.52□□□□□ -2.17
CD44-233ENST00000531141 SCN2BO60939 215 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 VAPBO95292 243 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 AHSA1O95433 338 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 FADS2O95864 444 aaKnown RBP1.52□□□□□ -2.17
CD44-233ENST00000531141 TRGV3P03979 118 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 RHOCP08134 193 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 BGNP21810 368 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 LCN1P31025 176 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 BLVRAP53004 296 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 PTRHD1Q6GMV3 140 aaKnown RBP1.52□□□□□ -2.17
CD44-233ENST00000531141 ASCL4Q6XD76 172 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 NELFCDQ8IXH7 590 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 ZFP82Q8N141 532 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 ZNF738Q8NE65 137 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 OR7G1Q8NGA0 311 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 LRRC45Q96CN5 670 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 TCEAL4Q96EI5 215 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 PYURFQ96I23 114 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 GOLPH3Q9H4A6 298 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 RHOFQ9HBH0 211 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 VCX3AQ9NNX9 186 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 SDHAF3Q9NRP4 125 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 NKIRAS1Q9NYS0 192 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 SAMHD1Q9Y3Z3 626 aaKnown RBP1.52□□□□□ -2.17
CD44-233ENST00000531141 ATP6V1DQ9Y5K8 247 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 V9GYY5 206 aaPredicted RBP1.52□□□□□ -2.17
CD44-233ENST00000531141 ABCA4P78363 2273 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms