RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 VASH2Q86V25 355 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 RAB40CQ96S21 281 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 CACNA1DQ01668 2161 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 C22orf46C9J442 243 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 OR7C2O60412 319 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 ZNF324O75467 553 aaPredicted RBP12.01□□□□□ -0.49
PCF11-204ENST00000530660 IGHG1P01857 330 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 FAM58AQ8N1B3 248 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 OR51H1Q8NH63 302 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 SGCZQ96LD1 299 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 PNRC2Q9NPJ4 139 aaKnown RBP12.01□□□□□ -0.49
PCF11-204ENST00000530660 SIRPB1O00241 398 aa12□□□□□ -0.49
PCF11-204ENST00000530660 S1PR2O95136 353 aa12□□□□□ -0.49
PCF11-204ENST00000530660 CLDN15P56746 228 aa12□□□□□ -0.49
PCF11-204ENST00000530660 SLC35B1P78383 322 aa12□□□□□ -0.49
PCF11-204ENST00000530660 PRSS57Q6UWY2 283 aa12□□□□□ -0.49
PCF11-204ENST00000530660 ASCL4Q6XD76 172 aa12□□□□□ -0.49
PCF11-204ENST00000530660 OR10G8Q8NGN5 311 aa12□□□□□ -0.49
PCF11-204ENST00000530660 TMEM186Q96B77 213 aa12□□□□□ -0.49
PCF11-204ENST00000530660 MMABQ96EY8 250 aaPredicted RBP12□□□□□ -0.49
PCF11-204ENST00000530660 CACNG5Q9UF02 275 aa12□□□□□ -0.49
PCF11-204ENST00000530660 RARRES3Q9UL19 164 aa12□□□□□ -0.49
PCF11-204ENST00000530660 SYNGR2O43760 224 aa12□□□□□ -0.49
PCF11-204ENST00000530660 CD38P28907 300 aa12□□□□□ -0.49
PCF11-204ENST00000530660 APOBEC3AP31941 199 aaPredicted RBP12□□□□□ -0.49
PCF11-204ENST00000530660 TIMP3P35625 211 aa12□□□□□ -0.49
PCF11-204ENST00000530660 RPS16P62249 146 aaKnown RBP12□□□□□ -0.49
PCF11-204ENST00000530660 HBG1P69891 147 aa12□□□□□ -0.49
PCF11-204ENST00000530660 HBG2P69892 147 aa12□□□□□ -0.49
PCF11-204ENST00000530660 NAT8BQ9UHF3 227 aa12□□□□□ -0.49
PCF11-204ENST00000530660 IGKV1-27A0A075B6S5 117 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 M0R296 226 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 TMPRSS2O15393 492 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 FAM71F2Q6NXP2 309 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 OCC1Q8TAD7 63 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 BORCS7Q96B45 105 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 COL6A3P12111 3177 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 GATA2P23769 480 aaPredicted RBP11.99□□□□□ -0.49
PCF11-204ENST00000530660 SAMD13Q5VXD3 122 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 ZNF776Q68DI1 518 aaPredicted RBP11.99□□□□□ -0.49
PCF11-204ENST00000530660 H1FNTQ75WM6 255 aaPredicted RBP11.99□□□□□ -0.49
PCF11-204ENST00000530660 FER1L6-AS1Q8NA97 138 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 ADIPOR1Q96A54 375 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 APOBEC3DQ96AK3 386 aaPredicted RBP11.99□□□□□ -0.49
PCF11-204ENST00000530660 DEFB118Q96PH6 123 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 ZNF442Q9H7R0 627 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 CD207Q9UJ71 328 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 TRAV9-2A0A087WT02 112 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 GJE1A6NN92 205 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 H3BML4 177 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 PAX2Q02962 417 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 SLC38A11Q08AI6 406 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 OR2M7Q8NG81 312 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 OR4S2Q8NH73 311 aa11.99□□□□□ -0.49
PCF11-204ENST00000530660 MTIF3Q9H2K0 278 aaKnown RBP11.99□□□□□ -0.49
PCF11-204ENST00000530660 AHRRA9YTQ3 701 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 SHISA8B8ZZ34 492 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 CELA2BP08218 269 aaPredicted RBP11.98□□□□□ -0.49
PCF11-204ENST00000530660 RBPJQ06330 500 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 ZNF542PQ5EBM4 170 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 WDR5BQ86VZ2 330 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 OOSP2Q86WS3 158 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 BMFQ96LC9 184 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 CLEC5AQ9NY25 188 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 SLC22A20A6NK97 555 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 G3V4G9 280 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 DHRS3O75911 302 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 SCTP09683 121 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 PSG7Q13046 419 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 BVES-AS1Q5T3Y7 98 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 OR1B1Q8NGR6 318 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 SRIP30626 198 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 CLRN1P58418 232 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 DEFB125Q8N687 156 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 TSKUQ8WUA8 353 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 WDFY3Q8IZQ1 3526 aa11.98□□□□□ -0.49
PCF11-204ENST00000530660 IGKV1-12A0A0C4DH73 117 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 C17orf112F2Z3M2 114 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 IGKV1D-12P01611 117 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 HNRNPA1P09651 372 aaKnown RBP eCLIP11.97□□□□□ -0.49
PCF11-204ENST00000530660 PSG2P11465 335 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 SELENOVP59797 346 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 ARF6P62330 175 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 PLCXD3Q63HM9 321 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 OR8I2Q8N0Y5 310 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 OR5D13Q8NGL4 314 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 SLC37A2Q8TED4 501 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 CA7P43166 264 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 LGALS4P56470 323 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 ZNF324BQ6AW86 544 aaPredicted RBP11.97□□□□□ -0.49
PCF11-204ENST00000530660 OR2Y1Q8NGV0 311 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 QTRT1Q9BXR0 403 aaKnown RBP11.97□□□□□ -0.49
PCF11-204ENST00000530660 IL36BQ9NZH7 164 aa11.97□□□□□ -0.49
PCF11-204ENST00000530660 PIAS2O75928 621 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 RUNX3Q13761 415 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 IGFBP7Q16270 282 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 MED12LQ86YW9 2145 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 OR10P1Q8NGE3 313 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 GP6Q9HCN6 339 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 PGLYRP1O75594 196 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms