RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 ZNF230Q9UIE0 474 aaPredicted RBP3.25□□□□□ -1.89
USP47-209ENST00000530041 SLC22A7Q9Y694 548 aa3.25□□□□□ -1.89
USP47-209ENST00000530041 MUC22E2RYF6 1773 aaPredicted RBP3.25□□□□□ -1.89
USP47-209ENST00000530041 EP400Q96L91 3159 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 IGKV1D-42A0A075B6H8 117 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 TMEM72A0PK05 275 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 C9orf170A2RU37 121 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 CEACAM18A8MTB9 384 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 LINC00587B1AMM8 73 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 HSBP1O75506 76 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 EIF3GO75821 320 aaKnown RBP eCLIP3.24□□□□□ -1.89
USP47-209ENST00000530041 FARS2O95363 451 aaKnown RBP3.24□□□□□ -1.89
USP47-209ENST00000530041 GPR75O95800 540 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 ACTL6AO96019 429 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 HLA-HP01893 362 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 CD5P06127 495 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 CRHP06850 196 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 TPT1P13693 172 aaKnown RBP3.24□□□□□ -1.89
USP47-209ENST00000530041 RCC1P18754 421 aaPredicted RBP3.24□□□□□ -1.89
USP47-209ENST00000530041 PMCHP20382 165 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 AK4P27144 223 aaPredicted RBP3.24□□□□□ -1.89
USP47-209ENST00000530041 GABRA3P34903 492 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 P2RY2P41231 377 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 NPBWR2P48146 333 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 KCNJ3P48549 501 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 ARHGDIBP52566 201 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 PRPS1P60891 318 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 ECH1Q13011 328 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 DHRS2Q13268 280 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 VAMP3Q15836 100 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 C17orf58Q2M2W7 97 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 TMEM244Q5VVB8 128 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 ANGPTL5Q86XS5 388 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 LYPD6Q86Y78 171 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 CBLN2Q8IUK8 224 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 BAP18Q8IXM2 172 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 ZNF491Q8N8L2 437 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 OR51D1Q8NGF3 324 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 LYPD6BQ8NI32 183 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 RXFP4Q8TDU9 374 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 PPP1R1CQ8WVI7 109 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 GTSF1Q8WW33 167 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 FAM131CQ96AQ9 280 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 FAM3DQ96BQ1 224 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 SMIM8Q96KF7 97 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 OR2A5Q96R48 311 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 OR8B4Q96RC9 309 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 TBX15Q96SF7 602 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 NMNAT3Q96T66 252 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 CMSS1Q9BQ75 279 aaKnown RBP3.24□□□□□ -1.89
USP47-209ENST00000530041 NRIP2Q9BQI9 281 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 ZNF251Q9BRH9 671 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 PDCD10Q9BUL8 212 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 RNF126Q9BV68 326 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 ZNF471Q9BX82 626 aaPredicted RBP3.24□□□□□ -1.89
USP47-209ENST00000530041 SLC17A9Q9BYT1 436 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 ACTR3CQ9C0K3 210 aaPredicted RBP3.24□□□□□ -1.89
USP47-209ENST00000530041 TLNRD1Q9H1K6 362 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 TUBA4BQ9H853 241 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 UQCC1Q9NVA1 299 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 COMMD9Q9P000 198 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 ANAPC10Q9UM13 185 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 SLC17A4Q9Y2C5 497 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 HEBP2Q9Y5Z4 205 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 TMEM14AQ9Y6G1 99 aa3.24□□□□□ -1.89
USP47-209ENST00000530041 TVP23AA6NH52 213 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 ZNF860A6NHJ4 632 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 OR2AT4A6NND4 320 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 ZNF736B4DX44 427 aaPredicted RBP3.23□□□□□ -1.89
USP47-209ENST00000530041 H0Y9J4 135 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 MFNGO00587 321 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 CDX4O14627 284 aaPredicted RBP3.23□□□□□ -1.89
USP47-209ENST00000530041 CCL16O15467 120 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 GATCO43716 136 aaKnown RBP3.23□□□□□ -1.89
USP47-209ENST00000530041 EIF1BO60739 113 aaKnown RBP3.23□□□□□ -1.89
USP47-209ENST00000530041 ALOX12BO75342 701 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 NDUFS6O75380 124 aaKnown RBP3.23□□□□□ -1.89
USP47-209ENST00000530041 CBR3O75828 277 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 RPP14O95059 124 aaKnown RBP3.23□□□□□ -1.89
USP47-209ENST00000530041 IGKV1D-16P01601 117 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 IGHV3-9P01782 118 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 IGHV2-5P01817 119 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 MAS1P04201 325 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 FABP1P07148 127 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 HOXC4P09017 264 aaPredicted RBP3.23□□□□□ -1.89
USP47-209ENST00000530041 ASAH2BP0C7U1 165 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 SLC35E2P0CK97 266 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 PVRP15151 417 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 NQO2P16083 231 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 TBPP20226 339 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 S100PP25815 95 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 PSMB6P28072 239 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 IL12BP29460 328 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 MAS1LP35410 378 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 AQP2P41181 271 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 EIF1P41567 113 aaKnown RBP3.23□□□□□ -1.89
USP47-209ENST00000530041 CAV2P51636 162 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 TAS2R31P59538 309 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 RAB5BP61020 215 aa3.23□□□□□ -1.89
USP47-209ENST00000530041 IL15RAQ13261 267 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms