RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 BRI3O95415 125 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 CA2P00918 260 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 CSN3P07498 182 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 GTF2A1P52655 376 aaPredicted RBP6.82□□□□□ -1.32
VPS11-203ENST00000529545 RIPK1Q13546 671 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 FXYD3Q14802 87 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 RPL22L1Q6P5R6 122 aaKnown RBP6.82□□□□□ -1.32
VPS11-203ENST00000529545 IL34Q6ZMJ4 242 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 OR5T1Q8NG75 326 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 GRPEL2Q8TAA5 225 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 GHSRQ92847 366 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 MISP3Q96FF7 219 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 Q96MT0 163 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 ZNF184Q99676 751 aaPredicted RBP6.82□□□□□ -1.32
VPS11-203ENST00000529545 SELENOIQ9C0D9 397 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 MBNL3Q9NUK0 354 aaKnown RBP6.82□□□□□ -1.32
VPS11-203ENST00000529545 ERVK13-1Q9NX77 482 aa6.82□□□□□ -1.32
VPS11-203ENST00000529545 IZUMO1RA6ND01 250 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 OR11H12B2RN74 326 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 H0YJW9 148 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 SC5DO75845 299 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 SPDEFO95238 335 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 CT45A6P0DMU7 189 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 CT45A5P0DMU8 189 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 CT45A7P0DMV0 189 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 CPEP16870 476 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 LGALS7P47929 136 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 RPS16P62249 146 aaKnown RBP6.81□□□□□ -1.32
VPS11-203ENST00000529545 PMS2P11Q13670 270 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 PSG5Q15238 335 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 GUCA2BQ16661 112 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 CCDC58Q4VC31 144 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 AWAT2Q6E213 333 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 GLIPR1L1Q6UWM5 242 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 GLDNQ6ZMI3 551 aaPredicted RBP6.81□□□□□ -1.32
VPS11-203ENST00000529545 JAGN1Q8N5M9 183 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 DEFB125Q8N687 156 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 DYNLRB2Q8TF09 96 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 IL1F10Q8WWZ1 152 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 SNAPC3Q92966 411 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 MUL1Q969V5 352 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 WDR89Q96FK6 387 aaPredicted RBP6.81□□□□□ -1.32
VPS11-203ENST00000529545 USMG5Q96IX5 58 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 TMEM68Q96MH6 324 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 IFI27L2Q9H2X8 130 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 SRD5A3Q9H8P0 318 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 SLC23A1Q9UHI7 598 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 OAZ3Q9UMX2 235 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 HERC2O95714 4834 aa6.81□□□□□ -1.32
VPS11-203ENST00000529545 SAC3D1A6NKF1 404 aa6.8□□□□□ -1.32
VPS11-203ENST00000529545 PDCD6O75340 191 aa6.8□□□□□ -1.32
VPS11-203ENST00000529545 CRTAPO75718 401 aaPredicted RBP6.8□□□□□ -1.32
VPS11-203ENST00000529545 MGMTP16455 207 aa6.8□□□□□ -1.32
VPS11-203ENST00000529545 RPL39P5Q59GN2 51 aa6.8□□□□□ -1.32
VPS11-203ENST00000529545 DMKNQ6E0U4 476 aaPredicted RBP6.8□□□□□ -1.32
VPS11-203ENST00000529545 ZNF343Q6P1L6 599 aa6.8□□□□□ -1.32
VPS11-203ENST00000529545 BVESQ8NE79 360 aa6.8□□□□□ -1.32
VPS11-203ENST00000529545 OR5AN1Q8NGI8 311 aa6.8□□□□□ -1.32
VPS11-203ENST00000529545 MRPL30Q8TCC3 161 aaKnown RBP6.8□□□□□ -1.32
VPS11-203ENST00000529545 CENPNQ96H22 339 aaPredicted RBP6.8□□□□□ -1.32
VPS11-203ENST00000529545 KRTAP4-12Q9BQ66 201 aa6.8□□□□□ -1.32
VPS11-203ENST00000529545 BANF2Q9H503 90 aa6.8□□□□□ -1.32
VPS11-203ENST00000529545 KLK5Q9Y337 293 aaPredicted RBP6.8□□□□□ -1.32
VPS11-203ENST00000529545 ANKRD65E5RJM6 399 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 NDUFB8O95169 186 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 BAG2O95816 211 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 APOA2P02652 100 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 CD7P09564 240 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 CAPGP40121 348 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 MECP2P51608 486 aaKnown RBP6.79□□□□□ -1.32
VPS11-203ENST00000529545 ALDH3A2P51648 485 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 DYRK1AQ13627 763 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 HMGN3Q15651 99 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 CD300EQ496F6 205 aaPredicted RBP6.79□□□□□ -1.32
VPS11-203ENST00000529545 TMPRSS11AQ6ZMR5 421 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 SLC16A13Q7RTY0 426 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 C5orf24Q7Z6I8 188 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 ORAI1Q96D31 301 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 ABHD14BQ96IU4 210 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 NEDD4LQ96PU5 975 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 TINAGL1Q9GZM7 467 aaPredicted RBP6.79□□□□□ -1.32
VPS11-203ENST00000529545 CHMP1AQ9HD42 196 aaPredicted RBP6.79□□□□□ -1.32
VPS11-203ENST00000529545 AMBNQ9NP70 447 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 COA4Q9NYJ1 87 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 AASSQ9UDR5 926 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 ADAM30Q9UKF2 790 aa6.79□□□□□ -1.32
VPS11-203ENST00000529545 RPL36Q9Y3U8 105 aaKnown RBP6.79□□□□□ -1.32
VPS11-203ENST00000529545 ZNF785A8K8V0 405 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 ITGB1BP1O14713 200 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 TRBV12-3P01733 135 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 IGFBP3P17936 291 aaPredicted RBP6.78□□□□□ -1.32
VPS11-203ENST00000529545 ZIK1Q3SY52 487 aaPredicted RBP6.78□□□□□ -1.32
VPS11-203ENST00000529545 Q499Y3 187 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 C1orf146Q5VVC0 180 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 CEMP1Q6PRD7 247 aaPredicted RBP6.78□□□□□ -1.32
VPS11-203ENST00000529545 PDPNQ86YL7 162 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 CDH26Q8IXH8 852 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 OR52I1Q8NGK6 324 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 SETD6Q8TBK2 473 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 THRSPQ92748 146 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms