RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SOX15O60248 233 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 GSTT2P0CG29 244 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 GSTT2BP0CG30 244 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 ZBTB25P24278 435 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 PSMD7P51665 324 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 LUMP51884 338 aaPredicted RBP8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 RAB25P57735 213 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 CX3CL1P78423 397 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 FHL3Q13643 280 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 UBE2UQ5VVX9 321 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 C22orf42Q6IC83 251 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 SPARTQ8N0X7 666 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 ZNF491Q8N8L2 437 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 OR8U1Q8NH10 309 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 C4orf3Q8WVX3 66 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 MAFIPQ8WZ33 124 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 C5orf30Q96GV9 206 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 TOLLIPQ9H0E2 274 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 RDH8Q9NYR8 311 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 ELF5Q9UKW6 265 aaPredicted RBP8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 IGKV1D-8A0A087WSZ0 117 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 OR5H14A6NHG9 310 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 I3L521 148 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 MFNGO00587 321 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 PDCD5O14737 125 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 HSPA12AO43301 675 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 IGKV1-16P04430 117 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 FCGR3AP08637 254 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 OR5H8P0DN80 308 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 GNB3P16520 340 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 RAB3BP20337 219 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 MC5RP33032 325 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 RAB9AP51151 201 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 CRIP2P52943 208 aaPredicted RBP8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 GABARAPL2P60520 117 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 GNB1P62873 340 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 PSG5Q15238 335 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 IGSF11Q5DX21 431 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 DEFB121Q5J5C9 76 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 OR11H1Q8NG94 326 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 OR10R2Q8NGX6 335 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 CASTOR1Q8WTX7 329 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 EDARADDQ8WWZ3 215 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 RAB3CQ96E17 227 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 OR5B12Q96R08 314 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 CLCC1Q96S66 551 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 CHCHD6Q9BRQ6 235 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 MCRIP2Q9BUT9 160 aaKnown RBP8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 ZNF230Q9UIE0 474 aaPredicted RBP8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 SCOCQ9UIL1 159 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 BLOC1S6Q9UL45 172 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 MGAT4AQ9UM21 535 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 WASHC3Q9Y3C0 194 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 NUBP2Q9Y5Y2 271 aa8.11□□□□□ -1.11
PRPF40B-204ENST00000527253 A0A075B6Q4 140 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 TRBV6-7A0A0A0MS04 114 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 H7C2Y5 167 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 FABP7O15540 132 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 MRPS14O60783 128 aaKnown RBP8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 RAB6AP20340 208 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 GALP22466 123 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 ECSCRQ19T08 205 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 ZNF660Q6AZW8 331 aaPredicted RBP8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 OR4A4PQ8NGN8 299 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 OR1N2Q8NGR9 330 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 UBE2E2Q96LR5 201 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 RNF5Q99942 180 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 FAM103A1Q9BTL3 118 aaKnown RBP8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 CABLES2Q9BTV7 478 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 GPR61Q9BZJ8 451 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 ALX4Q9H161 411 aaPredicted RBP8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 GHITMQ9H3K2 345 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 TXNL4BQ9NX01 149 aaKnown RBP8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 KIAA1456Q9P272 454 aa8.1□□□□□ -1.11
PRPF40B-204ENST00000527253 M0R1X1 148 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 BET1O15155 118 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 RBBP9O75884 186 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 IGLV2-23P01705 113 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 TFAP2AP05549 437 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 GSTP1P09211 210 aaKnown RBP8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 OR8U9P0C7N5 309 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 HIST1H1DP16402 221 aaKnown RBP8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 MYL9P24844 172 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 SSBP2P81877 361 aaPredicted RBP8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 DGCR2P98153 550 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 RUNX1Q01196 453 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 C11orf87Q6NUJ2 197 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 TMEM65Q6PI78 240 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 OR5M8Q8NGP6 311 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 DPF1Q92782 380 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 SDHAF2Q9NX18 166 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 METTL1Q9UBP6 276 aaKnown RBP8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 ZNF221Q9UK13 617 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 VSIG4Q9Y279 399 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 A3GALT2U3KPV4 340 aa8.09□□□□□ -1.11
PRPF40B-204ENST00000527253 DNAH9Q9NYC9 4486 aa8.09□□□□□ -1.12
PRPF40B-204ENST00000527253 COL7A1Q02388 2944 aa8.09□□□□□ -1.12
PRPF40B-204ENST00000527253 A0A1W2PN81 502 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 SEC14L6B5MCN3 397 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms