RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 TUBA4BQ9H853 241 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 CACNA1AO00555 2505 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 RNF212BA8MTL3 300 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 FAM157AC9JC47 383 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 GYPAP02724 150 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 SPP1P10451 314 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 RNF212Q495C1 297 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 ZNF645Q8N7E2 425 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 PBDC1Q9BVG4 233 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 PLEKHF2Q9H8W4 249 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 ATRXP46100 2492 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 TRAV38-1A0A0B4J264 116 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 VDAC1P21796 283 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 PPP1CCP36873 323 aaKnown RBP13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 RAB5BP61020 215 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 GNMTQ14749 295 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 ZNF788Q6ZQV5 615 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 TGIF2LYQ8IUE0 185 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 FAM219AQ8IW50 185 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 DRAM1Q8N682 238 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 C14orf79Q96F83 325 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 CCL13Q99616 98 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 RAB9BQ9NP90 201 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 LIN7CQ9NUP9 197 aaKnown RBP13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 ICE1Q9Y2F5 2266 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 A0A1B0GW64 132 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 MEX3AA1L020 520 aaKnown RBP13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 PLAUP00749 431 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 SNCAP37840 140 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 S100A12P80511 92 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 OR52M1Q8NGK5 317 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 CCL17Q92583 94 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 GAFA1Q96PS6 74 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 OR2D2Q9H210 308 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 DCAF16Q9NXF7 216 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 CACFD1Q9UGQ2 172 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 RNF150Q9ULK6 438 aa13.48□□□□□ -0.25
SNRNP35-204ENST00000527158 NKX6-3A6NJ46 265 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 ZNF16P17020 682 aaPredicted RBP13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 RXFP4Q8TDU9 374 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 GNG12Q9UBI6 72 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 PPIAL4EA0A075B759 164 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 IGHV3-43A0A0B4J1X8 118 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 ZNF98A6NK75 572 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 PPIAL4DF5H284 164 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 TMEM178BH3BS89 294 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 CRYBA1P05813 215 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 PPIAL4FP0DN26 164 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 IGHV3-43DP0DP04 118 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 SELLP14151 372 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 CAMLGP49069 296 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 MSMO1Q15800 293 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 LTC4SQ16873 150 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 EDARADDQ8WWZ3 215 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 TMEM106BQ9NUM4 274 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 JPT1Q9UK76 154 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 PPIAL4AQ9Y536 164 aa13.47□□□□□ -0.25
SNRNP35-204ENST00000527158 F12P00748 615 aaPredicted RBP13.46□□□□□ -0.25
SNRNP35-204ENST00000527158 PLA2G5P39877 138 aa13.46□□□□□ -0.25
SNRNP35-204ENST00000527158 ZNF266Q14584 549 aa13.46□□□□□ -0.25
SNRNP35-204ENST00000527158 ZNF672Q499Z4 452 aaPredicted RBP13.46□□□□□ -0.25
SNRNP35-204ENST00000527158 FAM53AQ6NSI3 398 aaPredicted RBP13.46□□□□□ -0.25
SNRNP35-204ENST00000527158 MUC15Q8N387 334 aa13.46□□□□□ -0.25
SNRNP35-204ENST00000527158 OR4D5Q8NGN0 318 aa13.46□□□□□ -0.25
SNRNP35-204ENST00000527158 SMIM3Q9BZL3 60 aa13.46□□□□□ -0.25
SNRNP35-204ENST00000527158 KIAA2026Q5HYC2 2103 aa13.46□□□□□ -0.26
SNRNP35-204ENST00000527158 TRGV10A0A0A0MS01 117 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 COLCA2A8K830 154 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 TMPRSS2O15393 492 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 ADAM20O43506 726 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 DYSFO75923 2080 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 TFF3Q07654 80 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 GUK1Q16774 197 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 MIDNQ504T8 468 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 FAM216BQ8N7L0 139 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 C19orf12Q9NSK7 152 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 CALYQ9NYX4 217 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 PLA2G2EQ9NZK7 142 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 CLEC18AA5D8T8 446 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 DEFB108AA8MXU0 73 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 C1orf196B1AJZ1 125 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 SIAH2O43255 324 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 MT-ND4LP03901 98 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 MMP9P14780 707 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 AKR1D1P51857 326 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 NMSQ5H8A3 153 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 DUX4L9Q6RFH8 374 aaPredicted RBP13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 ZNF808Q8N4W9 903 aaPredicted RBP13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 CLEC18CQ8NCF0 446 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 RNASE11Q8TAA1 199 aaKnown RBP13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 FAM216AQ8WUB2 273 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 SLC25A31Q9H0C2 315 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 CACNA1DQ01668 2161 aa13.45□□□□□ -0.26
SNRNP35-204ENST00000527158 UMAD1C9J7I0 102 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 F2RL2O00254 374 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 AGPAT2O15120 278 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 YPEL1O60688 119 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 NFYBP25208 207 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 NKX2-1P43699 371 aaPredicted RBP13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 CATR1Q13166 79 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms