RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 TCTEX1D2Q8WW35 142 aa13.21□□□□□ -0.3
USH1C-204ENST00000526313 LRRC46Q96FV0 321 aa13.21□□□□□ -0.3
USH1C-204ENST00000526313 NARS2Q96I59 477 aaKnown RBP13.21□□□□□ -0.3
USH1C-204ENST00000526313 ATP5SQ99766 215 aa13.21□□□□□ -0.3
USH1C-204ENST00000526313 SCRT1Q9BWW7 348 aa13.21□□□□□ -0.3
USH1C-204ENST00000526313 CALYQ9NYX4 217 aa13.21□□□□□ -0.3
USH1C-204ENST00000526313 HSPB7Q9UBY9 170 aa13.21□□□□□ -0.3
USH1C-204ENST00000526313 LAMP3Q9UQV4 416 aa13.21□□□□□ -0.3
USH1C-204ENST00000526313 DSCAML1Q8TD84 2053 aa13.2□□□□□ -0.3
USH1C-204ENST00000526313 TLN1Q9Y490 2541 aaKnown RBP13.2□□□□□ -0.3
USH1C-204ENST00000526313 LOC105371267A0A1B0GV96 52 aa13.2□□□□□ -0.3
USH1C-204ENST00000526313 MEX3AA1L020 520 aaKnown RBP13.2□□□□□ -0.3
USH1C-204ENST00000526313 SIGLEC5O15389 551 aa13.2□□□□□ -0.3
USH1C-204ENST00000526313 S1PR2O95136 353 aa13.2□□□□□ -0.3
USH1C-204ENST00000526313 SELLP14151 372 aa13.2□□□□□ -0.3
USH1C-204ENST00000526313 BTNL3Q6UXE8 466 aa13.2□□□□□ -0.3
USH1C-204ENST00000526313 STX12Q86Y82 276 aa13.2□□□□□ -0.3
USH1C-204ENST00000526313 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.2□□□□□ -0.3
USH1C-204ENST00000526313 KDF1Q8NAX2 398 aaPredicted RBP13.2□□□□□ -0.3
USH1C-204ENST00000526313 ZNF665Q9H7R5 613 aa13.2□□□□□ -0.3
USH1C-204ENST00000526313 KCNJ16Q9NPI9 418 aa13.2□□□□□ -0.3
USH1C-204ENST00000526313 DYSFO75923 2080 aa13.2□□□□□ -0.3
USH1C-204ENST00000526313 UMAD1C9J7I0 102 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 RNASEK-C17orf49H0YIS7 233 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 RAB29O14966 203 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 DFFBO76075 338 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 TNFRSF1AP19438 455 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 DUTP33316 252 aaKnown RBP13.19□□□□□ -0.3
USH1C-204ENST00000526313 ZNF134P52741 427 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 EDDM3BP56851 147 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 TNFRSF9Q07011 255 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 BTN1A1Q13410 526 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 Q3ZCU0 254 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 TMEM217Q8N7C4 229 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 CD300LFQ8TDQ1 290 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 CORO2AQ92828 525 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 GNPNAT1Q96EK6 184 aaPredicted RBP13.19□□□□□ -0.3
USH1C-204ENST00000526313 SEC11CQ9BY50 192 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 RAB9BQ9NP90 201 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 C19orf12Q9NSK7 152 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 GNG12Q9UBI6 72 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 KBTBD11-OT1A0A1B0GTJ5 212 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 FAM157AC9JC47 383 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 KRASP01116 189 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 G6PCP35575 357 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 FHITP49789 147 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 DVL1P1P54792 670 aaPredicted RBP13.19□□□□□ -0.3
USH1C-204ENST00000526313 UBE2KP61086 200 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 ZNF816Q0VGE8 651 aaPredicted RBP13.19□□□□□ -0.3
USH1C-204ENST00000526313 SMUG1Q53HV7 270 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 SP5Q6BEB4 398 aaPredicted RBP13.19□□□□□ -0.3
USH1C-204ENST00000526313 DUX4L9Q6RFH8 374 aaPredicted RBP13.19□□□□□ -0.3
USH1C-204ENST00000526313 TCF23Q7RTU1 214 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 TGIF2LYQ8IUE0 185 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 IFI27L2Q9H2X8 130 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 NGBQ9NPG2 151 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.19□□□□□ -0.3
USH1C-204ENST00000526313 PSENENQ9NZ42 101 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 CLN8Q9UBY8 286 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 FAM96BQ9Y3D0 163 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 PCNX1Q96RV3 2341 aa13.19□□□□□ -0.3
USH1C-204ENST00000526313 LRRC30A6NM36 301 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 C1QL1O75973 258 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 SNCAP37840 140 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 GPR12P47775 334 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 CAMLGP49069 296 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 LINC00205P59089 165 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 OR2B11Q5JQS5 317 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 NCMAPQ5T1S8 102 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 NCR3LG1Q68D85 454 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 HAPLN4Q86UW8 402 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 OR2G3Q8NGZ4 309 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 TREM1Q9NP99 234 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 GFOD1Q9NXC2 390 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 SHISA9B4DS77 424 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 H3BP45 60 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 IAPPP10997 89 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 IRF2P14316 349 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 ARHGDIBP52566 201 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 DEFA5Q01523 94 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 LTC4SQ16873 150 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 AARDQ4LEZ3 155 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 TMEM182Q6ZP80 229 aaPredicted RBP13.18□□□□□ -0.3
USH1C-204ENST00000526313 CCL13Q99616 98 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 TMEM231Q9H6L2 316 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 DCAF16Q9NXF7 216 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 COQ3Q9NZJ6 369 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 RFNGQ9Y644 331 aa13.18□□□□□ -0.3
USH1C-204ENST00000526313 VSTM5A8MXK1 200 aa13.17□□□□□ -0.3
USH1C-204ENST00000526313 RBFOX2O43251 390 aaKnown RBP eCLIP13.17□□□□□ -0.3
USH1C-204ENST00000526313 TSPAN15O95858 294 aa13.17□□□□□ -0.3
USH1C-204ENST00000526313 CA7P43166 264 aa13.17□□□□□ -0.3
USH1C-204ENST00000526313 CCL8P80075 99 aa13.17□□□□□ -0.3
USH1C-204ENST00000526313 ARL16Q0P5N6 197 aa13.17□□□□□ -0.3
USH1C-204ENST00000526313 FBXL19-AS1Q494R0 122 aa13.17□□□□□ -0.3
USH1C-204ENST00000526313 TMEM14EPQ6UXP3 125 aa13.17□□□□□ -0.3
USH1C-204ENST00000526313 DMRTC2Q8IXT2 367 aaPredicted RBP13.17□□□□□ -0.3
USH1C-204ENST00000526313 SVBPQ8N300 66 aa13.17□□□□□ -0.3
USH1C-204ENST00000526313 DEFB108BQ8NET1 73 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms