RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TRAV9-2A0A087WT02 112 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 A0A087WUU8 490 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 IGKV1D-43A0A0B4J1Z2 117 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 A0A0B4J203 849 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 TRAV41A0A0B4J266 112 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 TRBV2A0A0J9YWF9 115 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 NBDYA0A0U1RRE5 68 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 hCG_1807616A0A1W2PRN6 198 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 A0A1W2PRQ8 180 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 SMIM9A6NGZ8 99 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 FAM223BA6NKX1 122 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ZNF850A8MQ14 1090 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 OR11H12B2RN74 326 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 C5orf58C9J3I9 102 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 H3BNG1 76 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 RFXANKO14593 260 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 HSD17B6O14756 317 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 CFLARO15519 480 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 LANCL1O43813 399 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 PLIN3O60664 434 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 NDUFB2O95178 105 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 SLC2A10O95528 541 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 DIRAS3O95661 229 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 CYB5AP00167 134 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 NPPAP01160 153 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 IFNA21P01568 189 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 IFNA17P01571 189 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 MT-ND2P03891 347 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 GAPDHP04406 335 aaKnown RBP1.01□□□□□ -2.25
CD44-212ENST00000524922 HLA-DPB1P04440 258 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 BCHEP06276 602 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 GKN3PP0CG01 181 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 TROVE2P10155 538 aaKnown RBP eCLIP1.01□□□□□ -2.25
CD44-212ENST00000524922 SPP1P10451 314 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 MYL2P10916 166 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 FUT1P19526 365 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 CCNA2P20248 432 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 GZMHP20718 246 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 FUT3P21217 361 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 CCL1P22362 96 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 SSTR1P30872 391 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 PRDX2P32119 198 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 S100A3P33764 101 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 SOAT1P35610 550 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 PTGFRP43088 359 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 GLP1RP43220 463 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 MAGEA2P43356 314 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ERFP50548 548 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 RAB13P51153 203 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 SLC7A2P52569 658 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 CDK6Q00534 326 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ZNF92Q03936 586 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 PRKCDQ05655 676 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ST3GAL3Q11203 375 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 RIPK1Q13546 671 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 DGCR6Q14129 220 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 RGNQ15493 299 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 SGCAQ16586 387 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 PRSS8Q16651 343 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 DEFB114Q30KQ6 69 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 KCTD21Q4G0X4 260 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 MESTQ5EB52 335 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 COQ5Q5HYK3 327 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 FAM201AQ5SY85 155 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 CARD17Q5XLA6 110 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 TNFAIP8L2Q6P589 184 aaPredicted RBP1.01□□□□□ -2.25
CD44-212ENST00000524922 TRAT1Q6PIZ9 186 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ZNF562Q6V9R5 426 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ASCL4Q6XD76 172 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ZNF600Q6ZNG1 722 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 Q6ZSA8 131 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 OLIG3Q7RTU3 272 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 PRUNE1Q86TP1 453 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 LINC00596Q86U02 117 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 GPHB5Q86YW7 130 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 NKAIN4Q8IVV8 208 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 FAM223AQ8IWN6 122 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 CTAGE3PQ8IX95 158 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 SAXO1Q8IYX7 474 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 SLC38A6Q8IZM9 456 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 GAPTQ8N292 157 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 KDM8Q8N371 416 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 LRRC18Q8N456 261 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 FAM86B1Q8N7N1 296 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ZNF676Q8N7Q3 588 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ZNF565Q8N9K5 539 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ZNF439Q8NDP4 499 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 TMEM185AQ8NFB2 350 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 OR56B2PQ8NGI1 322 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 OR4D6Q8NGJ1 314 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 OR2T27Q8NH04 317 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 NDNFQ8TB73 568 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 TMEM239Q8WW34 195 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 IFT81Q8WYA0 676 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 H1FXQ92522 213 aaKnown RBP1.01□□□□□ -2.25
CD44-212ENST00000524922 CPNE2Q96FN4 548 aaPredicted RBP1.01□□□□□ -2.25
CD44-212ENST00000524922 PRRC1Q96M27 445 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 SPACA5Q96QH8 159 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 RASL11BQ9BPW5 248 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 PRSS27Q9BQR3 290 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms