RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 FAM71F2Q6NXP2 309 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 ZNF833PQ6ZTB9 187 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 ADAD2Q8NCV1 583 aaKnown RBP12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 C5orf30Q96GV9 206 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 RTBDNQ9BSG5 229 aaPredicted RBP12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 YAE1D1Q9NRH1 226 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 DPM3Q9P2X0 92 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 GAB2Q9UQC2 676 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 TBL2Q9Y4P3 447 aaKnown RBP12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 CYSRT1A8MQ03 144 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 INMT-MINDY4F8WBC2 141 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 AKR1C4P17516 323 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 ANXA7P20073 488 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 SAA4P35542 130 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 ZNF137PP52743 207 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 RAB25P57735 213 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 RND3P61587 244 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 MINOS1Q5TGZ0 78 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 RUSC1-AS1Q66K80 236 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 C1orf229Q6ZS94 237 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 TGIF2LXQ8IUE1 241 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 TEX29Q8N6K0 151 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 RTN4IP1Q8WWV3 396 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 RPEQ96AT9 228 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 ZNF251Q9BRH9 671 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 TMUB1Q9BVT8 246 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 MINOS1-NBL1R4GNA1 71 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 WNK2Q9Y3S1 2297 aa12.85□□□□□ -0.35
TSPAN4-213ENST00000524895 TEX13DA0A0J9YY54 714 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 RNF212BA8MTL3 300 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 TXNL1O43396 289 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 PEX14O75381 377 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 PGLYRP1O75594 196 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 FOSL1P15407 271 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 EPHA1P21709 976 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 REG1BP48304 166 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 CATR1Q13166 79 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 KLF17Q5JT82 389 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 TPTE2P1Q5T6R2 138 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 BRD3OSQ6XYD6 125 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 ZNF66Q6ZN08 573 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 LHFPL4Q7Z7J7 247 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 TBC1D26Q86UD7 250 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 SLC25A42Q86VD7 318 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 NANPQ8TBE9 248 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 ST6GALNAC6Q969X2 333 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 TMEM230Q96A57 120 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 GPHA2Q96T91 129 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 HSD17B10Q99714 261 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 MARVELD1Q9BSK0 173 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 BEX2Q9BXY8 128 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 BEX1Q9HBH7 125 aa12.84□□□□□ -0.35
TSPAN4-213ENST00000524895 A8MV72 311 aaPredicted RBP12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 LY6LH3BQJ8 138 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 MPPED1O15442 326 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 DHFRP00374 187 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 GAPDHP04406 335 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 DUTP33316 252 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 RAG2P55895 527 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 UBE2MP61081 183 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 DIAPH2-AS1Q14236 149 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 C4orf46Q504U0 113 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 TMEM128Q5BJH2 165 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 C11orf88Q6PI97 169 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 KCTD9Q7L273 389 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 SGPP2Q8IWX5 399 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 DRAXINQ8NBI3 349 aaPredicted RBP12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 OR51H1Q8NH63 302 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 TCTEX1D2Q8WW35 142 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 MRPL20Q9BYC9 149 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 NAA60Q9H7X0 242 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 LIN7CQ9NUP9 197 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 HILPDAQ9Y5L2 63 aa12.83□□□□□ -0.36
TSPAN4-213ENST00000524895 ZNF469Q96JG9 3925 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 CRYM-AS1A6NIL9 109 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 OOSP1A8MZH6 123 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 PROP1O75360 226 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 FSHBP01225 129 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 HNF1AP20823 631 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 VAMP1P23763 118 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 THBS3P49746 956 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 MECP2P51608 486 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 BPIFB3P59826 476 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 ZNF816Q0VGE8 651 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 EIF4EBP1Q13541 118 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 SSX2Q16385 188 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 LDLRAD2Q5SZI1 272 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 FAM120AOSQ5T036 256 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 CCDC144NLQ6NUI1 221 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 CAPSLQ8WWF8 208 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 ADTRPQ96IZ2 230 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 SMR3AQ99954 134 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 NUP50Q9UKX7 468 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 CELSR1Q9NYQ6 3014 aa12.82□□□□□ -0.36
TSPAN4-213ENST00000524895 LINC00473A8K010 186 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 PRAF2O60831 178 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 LY6G6DO95868 133 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 HLA-AP01891 365 aaKnown RBP12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 OR4E1P0C645 316 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms