RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 WASHC3Q9Y3C0 194 aa16.49■□□□□ 0.23
TRAPPC9-215ENST00000524162 H0YJW9 148 aa16.48■□□□□ 0.23
TRAPPC9-215ENST00000524162 NBR2O15453 112 aa16.48■□□□□ 0.23
TRAPPC9-215ENST00000524162 RPS19P39019 145 aaKnown RBP16.48■□□□□ 0.23
TRAPPC9-215ENST00000524162 RPL39P5Q59GN2 51 aa16.48■□□□□ 0.23
TRAPPC9-215ENST00000524162 OR5H6Q8NGV6 325 aa16.48■□□□□ 0.23
TRAPPC9-215ENST00000524162 FUNDC2Q9BWH2 189 aa16.48■□□□□ 0.23
TRAPPC9-215ENST00000524162 DIABLOQ9NR28 239 aa16.48■□□□□ 0.23
TRAPPC9-215ENST00000524162 ZFP57Q9NU63 452 aa16.48■□□□□ 0.23
TRAPPC9-215ENST00000524162 ZNF230Q9UIE0 474 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC9-215ENST00000524162 TCRBV4S1A1TA0A5B7 111 aa16.47■□□□□ 0.23
TRAPPC9-215ENST00000524162 BET1O15155 118 aa16.47■□□□□ 0.23
TRAPPC9-215ENST00000524162 OR5H8P0DN80 308 aa16.47■□□□□ 0.23
TRAPPC9-215ENST00000524162 GNG2P59768 71 aa16.47■□□□□ 0.23
TRAPPC9-215ENST00000524162 C5orf64Q2M2E5 130 aa16.47■□□□□ 0.23
TRAPPC9-215ENST00000524162 H1FOOQ8IZA3 346 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC9-215ENST00000524162 RNF152Q8N8N0 203 aa16.47■□□□□ 0.23
TRAPPC9-215ENST00000524162 FAM110DQ8TAY7 271 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC9-215ENST00000524162 SLC25A46Q96AG3 418 aa16.47■□□□□ 0.23
TRAPPC9-215ENST00000524162 TMEM235A6NFC5 223 aa16.46■□□□□ 0.23
TRAPPC9-215ENST00000524162 TFAP2AP05549 437 aa16.46■□□□□ 0.23
TRAPPC9-215ENST00000524162 NSUN5P1Q3KNT7 163 aa16.46■□□□□ 0.23
TRAPPC9-215ENST00000524162 CNIH2Q6PI25 160 aa16.46■□□□□ 0.23
TRAPPC9-215ENST00000524162 FAM131AQ6UXB0 335 aa16.46■□□□□ 0.23
TRAPPC9-215ENST00000524162 PDPNQ86YL7 162 aa16.46■□□□□ 0.23
TRAPPC9-215ENST00000524162 CMTM3Q96MX0 182 aa16.46■□□□□ 0.23
TRAPPC9-215ENST00000524162 GINS4Q9BRT9 223 aa16.46■□□□□ 0.23
TRAPPC9-215ENST00000524162 KIAA1456Q9P272 454 aa16.46■□□□□ 0.23
TRAPPC9-215ENST00000524162 ELF5Q9UKW6 265 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC9-215ENST00000524162 IGKV1D-8A0A087WSZ0 117 aa16.45■□□□□ 0.22
TRAPPC9-215ENST00000524162 SPDEFO95238 335 aa16.45■□□□□ 0.22
TRAPPC9-215ENST00000524162 SMIM18P0DKX4 95 aa16.45■□□□□ 0.22
TRAPPC9-215ENST00000524162 TEX38Q6PEX7 206 aa16.45■□□□□ 0.22
TRAPPC9-215ENST00000524162 WFDC9Q8NEX5 89 aa16.45■□□□□ 0.22
TRAPPC9-215ENST00000524162 R3HDM4Q96D70 268 aa16.45■□□□□ 0.22
TRAPPC9-215ENST00000524162 S100A16Q96FQ6 103 aaKnown RBP16.45■□□□□ 0.22
TRAPPC9-215ENST00000524162 RITA1Q96K30 269 aa16.45■□□□□ 0.22
TRAPPC9-215ENST00000524162 NOL4LQ96MY1 436 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC9-215ENST00000524162 ZNF107Q9UII5 783 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC9-215ENST00000524162 LINC01548A6NM66 108 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 XRCC3O43542 346 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 SSX5O60225 188 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 SLC22A5O76082 557 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 OR8U9P0C7N5 309 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 CFHR3Q02985 330 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 UBE2NLQ5JXB2 153 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 LIN54Q6MZP7 749 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 C10orf99Q6UWK7 81 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 ZNF383Q8NA42 475 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 OR8U1Q8NH10 309 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 NUDCD2Q8WVJ2 157 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 MAFIPQ8WZ33 124 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 HSPB9Q9BQS6 159 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 ST6GALNAC5Q9BVH7 336 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 OR2D2Q9H210 308 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 AUNIPQ9H7T9 357 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 SDHAF2Q9NX18 166 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 ANXA10Q9UJ72 324 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 RNF150Q9ULK6 438 aa16.44■□□□□ 0.22
TRAPPC9-215ENST00000524162 TNCP24821 2201 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 TRAV18A0A075B6X5 111 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 RRHO14718 337 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 IGHG4P01861 327 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 APOA2P02652 100 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 ELANEP08246 267 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 CBX5P45973 191 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 CRIP2P52943 208 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 FOXE3Q13461 319 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 ZNF329Q86UD4 541 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 ANKRD13BQ86YJ7 626 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 ADTRPQ96IZ2 230 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 TSNAXQ99598 290 aaKnown RBP16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 OR2W1Q9Y3N9 320 aa16.43■□□□□ 0.22
TRAPPC9-215ENST00000524162 H7C2Y5 167 aa16.42■□□□□ 0.22
TRAPPC9-215ENST00000524162 TGFBR1P36897 503 aa16.42■□□□□ 0.22
TRAPPC9-215ENST00000524162 ZNF660Q6AZW8 331 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC9-215ENST00000524162 ACOT12Q8WYK0 555 aa16.42■□□□□ 0.22
TRAPPC9-215ENST00000524162 MRPS26Q9BYN8 205 aaKnown RBP16.42■□□□□ 0.22
TRAPPC9-215ENST00000524162 OR51J1Q9H342 316 aa16.42■□□□□ 0.22
TRAPPC9-215ENST00000524162 IGHV7-81A0A0B4J1V7 117 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 M0R1X1 148 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 GABARAPO95166 117 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 HLA-DQB1P01920 261 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 RRASP10301 218 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 VDAC1P21796 283 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 CNTFRP26992 372 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 LGALS7P47929 136 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 THBS3P49746 956 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 LSM3P62310 102 aaKnown RBP16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 RPL23AP62750 156 aaKnown RBP16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 HIST2H2BDQ6DRA6 164 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 GLDNQ6ZMI3 551 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 HOGA1Q86XE5 327 aa16.41■□□□□ 0.22
TRAPPC9-215ENST00000524162 TUSC2O75896 110 aa16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 IGKV1-16P04430 117 aa16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 PF4V1P10720 104 aa16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 NCS1P62166 190 aa16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 MSMO1Q15800 293 aa16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 KPRPQ5T749 579 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 TCTEX1D1Q8N7M0 179 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms