RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 TAGLNQ01995 201 aaKnown RBP13.55□□□□□ -0.24
CCNC-213ENST00000523541 CFHR3Q02985 330 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 PLA2G7Q13093 441 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 MOGAT2Q3SYC2 334 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 FOXB2Q5VYV0 432 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 ZNF660Q6AZW8 331 aaPredicted RBP13.55□□□□□ -0.24
CCNC-213ENST00000523541 NR2C2APQ86WQ0 139 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 ZNF695Q8IW36 515 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 KLHL30-AS1Q8NEE0 82 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 ABHD14BQ96IU4 210 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 CABLES2Q9BTV7 478 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 MCRIP2Q9BUT9 160 aaKnown RBP13.55□□□□□ -0.24
CCNC-213ENST00000523541 ATG5Q9H1Y0 275 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 DCSTAMPQ9H295 470 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 OR51J1Q9H342 316 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 RDH8Q9NYR8 311 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 IGKV1-6A0A0C4DH72 117 aa13.54□□□□□ -0.24
CCNC-213ENST00000523541 H0YJW9 148 aa13.54□□□□□ -0.24
CCNC-213ENST00000523541 GSTP1P09211 210 aaKnown RBP13.54□□□□□ -0.24
CCNC-213ENST00000523541 CTXN2P0C2S0 81 aa13.54□□□□□ -0.24
CCNC-213ENST00000523541 ARFRP1Q13795 201 aa13.54□□□□□ -0.24
CCNC-213ENST00000523541 RPL39P5Q59GN2 51 aa13.54□□□□□ -0.24
CCNC-213ENST00000523541 DPF1Q92782 380 aa13.54□□□□□ -0.24
CCNC-213ENST00000523541 RITA1Q96K30 269 aa13.54□□□□□ -0.24
CCNC-213ENST00000523541 HSPB9Q9BQS6 159 aa13.54□□□□□ -0.24
CCNC-213ENST00000523541 RRHO14718 337 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 TFAP2AP05549 437 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 PSMB8P28062 276 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 RAB25P57735 213 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 TIMM50Q3ZCQ8 353 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 CDNFQ49AH0 187 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 HACD4Q5VWC8 232 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 SFXN4Q6P4A7 337 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 FAM131AQ6UXB0 335 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 C8orf86Q6ZUL3 223 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 LINC00482Q8N8I6 264 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 TSNAXQ99598 290 aaKnown RBP13.53□□□□□ -0.24
CCNC-213ENST00000523541 PARP12Q9H0J9 701 aaKnown RBP13.53□□□□□ -0.24
CCNC-213ENST00000523541 OR51E2Q9H255 320 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 AURKAIP1Q9NWT8 199 aaPredicted RBP13.53□□□□□ -0.24
CCNC-213ENST00000523541 ZMAT5Q9UDW3 170 aaKnown RBP13.53□□□□□ -0.24
CCNC-213ENST00000523541 DAPK2Q9UIK4 370 aa13.53□□□□□ -0.24
CCNC-213ENST00000523541 A0A0A6YYH2 397 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 IGHV7-81A0A0B4J1V7 117 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 A6NJ64 397 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 H7C2Y5 167 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 PROP1O75360 226 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 SPDEFO95238 335 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 GSTT2P0CG29 244 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 GSTT2BP0CG30 244 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 SLC2A2P11168 524 aaPredicted RBP13.52□□□□□ -0.25
CCNC-213ENST00000523541 CD36P16671 472 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 PPIFP30405 207 aaKnown RBP13.52□□□□□ -0.25
CCNC-213ENST00000523541 SDC2P34741 201 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 CRIP2P52943 208 aaPredicted RBP13.52□□□□□ -0.25
CCNC-213ENST00000523541 TMEM267Q0VDI3 215 aaPredicted RBP13.52□□□□□ -0.25
CCNC-213ENST00000523541 PDPNQ86YL7 162 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 CROCCP3Q8IVE0 287 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 MRPL41Q8IXM3 137 aaKnown RBP13.52□□□□□ -0.25
CCNC-213ENST00000523541 TCTEX1D1Q8N7M0 179 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 RBMXL1Q96E39 390 aaKnown RBP13.52□□□□□ -0.25
CCNC-213ENST00000523541 P2RX4Q99571 388 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 VCX3AQ9NNX9 186 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 RNF150Q9ULK6 438 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 ETV7Q9Y603 341 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 DNAH3Q8TD57 4116 aa13.52□□□□□ -0.25
CCNC-213ENST00000523541 A0A075B6Q4 140 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 A0A0B4J203 849 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 BET1O15155 118 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 APOA2P02652 100 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 RPLP1P05386 114 aaKnown RBP13.51□□□□□ -0.25
CCNC-213ENST00000523541 CNTFRP26992 372 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 LGALS7P47929 136 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 IGSF11Q5DX21 431 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 TMEM65Q6PI78 240 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 ETV3LQ6ZN32 361 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 C18orf65Q6ZTR6 163 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 OR8U1Q8NH10 309 aa13.51□□□□□ -0.25
CCNC-213ENST00000523541 A0A087WXM4 84 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 TRAV41A0A0B4J266 112 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 SLC22A5O76082 557 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 TNFAIP8O95379 198 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 IGLV1-40P01703 118 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 RRASP10301 218 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 NEDD8Q15843 81 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 ZNF562Q6V9R5 426 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 ZNF383Q8NA42 475 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 MINDY2Q8NBR6 621 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 MYOZ3Q8TDC0 251 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 FLYWCH2Q96CP2 140 aaKnown RBP13.5□□□□□ -0.25
CCNC-213ENST00000523541 ADTRPQ96IZ2 230 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 UBE2E2Q96LR5 201 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 GINS4Q9BRT9 223 aa13.5□□□□□ -0.25
CCNC-213ENST00000523541 CCL24O00175 119 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 OR8U9P0C7N5 309 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 CX3CL1P78423 397 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 CBX3Q13185 183 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 PLGLAQ15195 96 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 AKIRIN2Q53H80 203 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 GLDNQ6ZMI3 551 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms