RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 KIAA0895LQ68EN5 471 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 MYO7BQ6PIF6 2116 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 GAPTQ8N292 157 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 NAT6Q93015 286 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 RAB40CQ96S21 281 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 MRPL18Q9H0U6 180 aaKnown RBP7.13□□□□□ -1.27
CSMD1-213ENST00000523488 ZNF816-ZNF321PA0A0X1KG74 233 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 LINC00869P0C866 280 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 HLA-DRB5Q30154 266 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 CARD17Q5XLA6 110 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 STUMQ69YW2 141 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 MRGPRX1Q96LB2 322 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 GNB1LQ9BYB4 327 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 PSENENQ9NZ42 101 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 TBL2Q9Y4P3 447 aaKnown RBP7.12□□□□□ -1.27
CSMD1-213ENST00000523488 DPRXA6NFQ7 191 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.12□□□□□ -1.27
CSMD1-213ENST00000523488 ADH1BP00325 375 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 TSPOP30536 169 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 C1orf61Q13536 156 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 KLF5Q13887 457 aaPredicted RBP7.12□□□□□ -1.27
CSMD1-213ENST00000523488 ST6GALNAC3Q8NDV1 305 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 ABHD3Q8WU67 409 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 AP1S3Q96PC3 154 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 GPHA2Q96T91 129 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 ARHGAP21Q5T5U3 1957 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 UBE2L5PA0A1B0GUS4 154 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 PPYP01298 95 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 IGKV1D-33P01593 117 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 IGKV1-33P01594 117 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 IGLV2-14P01704 120 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 HYAL1Q12794 435 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 SPANXN5Q5MJ07 72 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 NRN1Q9NPD7 142 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 TBC1D29Q9UFV1 150 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 FBXL7Q9UJT9 491 aa7.12□□□□□ -1.27
CSMD1-213ENST00000523488 VSTM2BA6NLU5 285 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 C11orf94C9JXX5 98 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 DEGS1O15121 323 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 EGR1P18146 543 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 GDF1P27539 372 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 IER3P46695 156 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 GRB2P62993 217 aaKnown RBP7.11□□□□□ -1.27
CSMD1-213ENST00000523488 MALLQ13021 153 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 IGFBP7Q16270 282 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 PET117Q6UWS5 81 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 TNFRSF14Q92956 283 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 NXF5Q9H1B4 397 aaKnown RBP7.11□□□□□ -1.27
CSMD1-213ENST00000523488 HRASLS2Q9NWW9 162 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 PIGLQ9Y2B2 252 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 WASHC3Q9Y3C0 194 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 SNURFLB1AK76 121 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 C9JCJ5 164 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 PRRT4C9JH25 899 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 SH2D1BO14796 132 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 HCRTR1O43613 425 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 LGALS4P56470 323 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 SYT13Q7L8C5 426 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.11□□□□□ -1.27
CSMD1-213ENST00000523488 IL23AQ9NPF7 189 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 RAB29O14966 203 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 SPRY1O43609 319 aaPredicted RBP7.11□□□□□ -1.27
CSMD1-213ENST00000523488 TNFP01375 233 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 CRYAAP02489 173 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 AREGP15514 252 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 RASL11AQ6T310 242 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 SAXO1Q8IYX7 474 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 MRPL43Q8N983 215 aaKnown RBP7.11□□□□□ -1.27
CSMD1-213ENST00000523488 NAT8BQ9UHF3 227 aa7.11□□□□□ -1.27
CSMD1-213ENST00000523488 SVILO95425 2214 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 CTXND1A0A1B0GTU2 59 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 RER1O15258 196 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 GALR2O43603 387 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-213ENST00000523488 PDCD1Q15116 288 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 COX19Q49B96 90 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 H1FNTQ75WM6 255 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-213ENST00000523488 RPP25LQ8N5L8 163 aaKnown RBP7.1□□□□□ -1.27
CSMD1-213ENST00000523488 OR52L2PQ8NGH6 319 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 OR10G9Q8NGN4 311 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 OR10G7Q8NGN6 311 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 ST8SIA1Q92185 356 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 GTF3C1Q12789 2109 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 C1QTNF9BB2RNN3 333 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 SIRPB1O00241 398 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 DHRS3O75911 302 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 EML2O95834 649 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 ZNF16P17020 682 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-213ENST00000523488 CRYGSP22914 178 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 CDAP32320 146 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 DUSP3P51452 185 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-213ENST00000523488 PRRX1P54821 245 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 PHYHD1Q5SRE7 291 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 DCAF12Q5T6F0 453 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 FAM71F2Q6NXP2 309 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 OR51H1Q8NH63 302 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 OR4S2Q8NH73 311 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 GATAD1Q8WUU5 269 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 TMEM54Q969K7 222 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 NABP1Q96AH0 204 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 BMFQ96LC9 184 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms